Hb_001948_010

Information

Type -
Description -
Location Contig1948: 7675-14761
Sequence    

Annotation

kegg
ID rcu:RCOM_0841580
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_012092524.1
description PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
swissprot
ID P37122
description Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1
trembl
ID A0A067JCP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05069 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 76a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001948_010 0.0 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
2 Hb_002495_020 0.2517832241 - - hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]
3 Hb_001488_050 0.2526355051 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 29-like [Jatropha curcas]
4 Hb_000046_130 0.2594327249 - - Peroxidase 27 precursor, putative [Ricinus communis]
5 Hb_008071_030 0.2598288463 - - -
6 Hb_002240_030 0.2604009488 - - -
7 Hb_020805_020 0.2628903317 - - -
8 Hb_001433_010 0.2637936044 - - -
9 Hb_002392_060 0.2731165617 - - gag/pol protein [Bryonia dioica]
10 Hb_002928_080 0.2733563225 - - PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Jatropha curcas]
11 Hb_100821_010 0.2753658301 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
12 Hb_000757_080 0.2801496404 - - vacuolar ATP synthase subunit G plant, putative [Ricinus communis]
13 Hb_181132_010 0.2816323429 - - -
14 Hb_003878_160 0.2881168514 - - conserved hypothetical protein [Ricinus communis]
15 Hb_008948_030 0.2900126398 - - hypothetical protein RCOM_0224470 [Ricinus communis]
16 Hb_003589_010 0.2910480154 - - -
17 Hb_155103_010 0.2926707733 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
18 Hb_004466_010 0.295443502 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
19 Hb_000733_110 0.2978737275 - - hypothetical protein JCGZ_01360 [Jatropha curcas]
20 Hb_000364_070 0.2990988367 transcription factor TF Family: AP2 PREDICTED: floral homeotic protein APETALA 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001948_010 Hb_001948_010 Hb_002495_020 Hb_002495_020 Hb_001948_010--Hb_002495_020 Hb_001488_050 Hb_001488_050 Hb_001948_010--Hb_001488_050 Hb_000046_130 Hb_000046_130 Hb_001948_010--Hb_000046_130 Hb_008071_030 Hb_008071_030 Hb_001948_010--Hb_008071_030 Hb_002240_030 Hb_002240_030 Hb_001948_010--Hb_002240_030 Hb_020805_020 Hb_020805_020 Hb_001948_010--Hb_020805_020 Hb_002495_020--Hb_001488_050 Hb_002495_020--Hb_000046_130 Hb_002495_020--Hb_002240_030 Hb_002495_020--Hb_020805_020 Hb_001433_010 Hb_001433_010 Hb_002495_020--Hb_001433_010 Hb_002392_060 Hb_002392_060 Hb_002495_020--Hb_002392_060 Hb_001488_050--Hb_000046_130 Hb_001488_050--Hb_002240_030 Hb_001488_050--Hb_020805_020 Hb_001488_050--Hb_001433_010 Hb_001488_050--Hb_002392_060 Hb_000046_130--Hb_002240_030 Hb_000046_130--Hb_020805_020 Hb_000046_130--Hb_001433_010 Hb_000046_130--Hb_002392_060 Hb_002928_080 Hb_002928_080 Hb_000046_130--Hb_002928_080 Hb_100821_010 Hb_100821_010 Hb_000046_130--Hb_100821_010 Hb_004466_010 Hb_004466_010 Hb_008071_030--Hb_004466_010 Hb_013394_010 Hb_013394_010 Hb_008071_030--Hb_013394_010 Hb_011344_080 Hb_011344_080 Hb_008071_030--Hb_011344_080 Hb_005800_040 Hb_005800_040 Hb_008071_030--Hb_005800_040 Hb_001251_030 Hb_001251_030 Hb_008071_030--Hb_001251_030 Hb_002240_030--Hb_020805_020 Hb_002240_030--Hb_001433_010 Hb_002240_030--Hb_002392_060 Hb_002240_030--Hb_002928_080 Hb_002240_030--Hb_100821_010 Hb_020805_020--Hb_001433_010 Hb_020805_020--Hb_002392_060 Hb_020805_020--Hb_002928_080 Hb_020805_020--Hb_100821_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.814577 0.0226052 0.0358358 0.0470118 0.0533329 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.337384 0

CAGE analysis