Hb_001951_060

Information

Type -
Description -
Location Contig1951: 41154-46131
Sequence    

Annotation

kegg
ID tcc:TCM_029534
description UDP-N-acetylglucosamine transferase subunit ALG14 isoform 1
nr
ID XP_012085407.1
description PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Jatropha curcas]
swissprot
ID Q6CF02
description UDP-N-acetylglucosamine transferase subunit ALG14 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG14 PE=3 SV=1
trembl
ID A0A061GF46
description UDP-N-acetylglucosamine transferase subunit ALG14 isoform 1 OS=Theobroma cacao GN=TCM_029534 PE=4 SV=1
Gene Ontology
ID GO:0016740
description udp-n-acetylglucosamine transferase subunit alg14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19472: 41115-41748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001951_060 0.0 - - PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Jatropha curcas]
2 Hb_001301_280 0.0737087407 - - conserved hypothetical protein [Ricinus communis]
3 Hb_034083_020 0.0819910457 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002486_080 0.0838307405 - - PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Jatropha curcas]
5 Hb_007416_070 0.0912252639 transcription factor TF Family: B3 hypothetical protein JCGZ_07038 [Jatropha curcas]
6 Hb_000365_010 0.0934756101 - - hypothetical protein POPTR_0006s10920g [Populus trichocarpa]
7 Hb_005016_010 0.0958897709 - - AMP dependent CoA ligase, putative [Ricinus communis]
8 Hb_000683_050 0.0981341709 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
9 Hb_001473_170 0.0991906976 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
10 Hb_000258_050 0.1009148332 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription repressor VAL2 isoform X2 [Jatropha curcas]
11 Hb_002281_020 0.1019786508 - - PREDICTED: actin-related protein 8 [Jatropha curcas]
12 Hb_010390_010 0.1023669871 - - casein kinase, putative [Ricinus communis]
13 Hb_000909_080 0.1038830451 - - PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Jatropha curcas]
14 Hb_180378_010 0.1049329367 - - PREDICTED: 4-alpha-glucanotransferase, chloroplastic/amyloplastic [Populus euphratica]
15 Hb_001811_170 0.1050583593 - - dynamin, putative [Ricinus communis]
16 Hb_011671_120 0.105867152 - - hypothetical protein JCGZ_26275 [Jatropha curcas]
17 Hb_001799_060 0.1060573548 - - Rab6 [Hevea brasiliensis]
18 Hb_001159_010 0.1066993107 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004607_070 0.1067606016 - - integral membrane protein, putative [Ricinus communis]
20 Hb_016219_010 0.109047445 - - hypothetical protein B456_001G213800 [Gossypium raimondii]

Gene co-expression network

sample Hb_001951_060 Hb_001951_060 Hb_001301_280 Hb_001301_280 Hb_001951_060--Hb_001301_280 Hb_034083_020 Hb_034083_020 Hb_001951_060--Hb_034083_020 Hb_002486_080 Hb_002486_080 Hb_001951_060--Hb_002486_080 Hb_007416_070 Hb_007416_070 Hb_001951_060--Hb_007416_070 Hb_000365_010 Hb_000365_010 Hb_001951_060--Hb_000365_010 Hb_005016_010 Hb_005016_010 Hb_001951_060--Hb_005016_010 Hb_001301_280--Hb_002486_080 Hb_001301_280--Hb_000365_010 Hb_011671_120 Hb_011671_120 Hb_001301_280--Hb_011671_120 Hb_001301_280--Hb_007416_070 Hb_001619_060 Hb_001619_060 Hb_001301_280--Hb_001619_060 Hb_000909_080 Hb_000909_080 Hb_034083_020--Hb_000909_080 Hb_001159_010 Hb_001159_010 Hb_034083_020--Hb_001159_010 Hb_000358_020 Hb_000358_020 Hb_034083_020--Hb_000358_020 Hb_005218_080 Hb_005218_080 Hb_034083_020--Hb_005218_080 Hb_034083_020--Hb_000365_010 Hb_002486_080--Hb_007416_070 Hb_000465_150 Hb_000465_150 Hb_002486_080--Hb_000465_150 Hb_002281_020 Hb_002281_020 Hb_002486_080--Hb_002281_020 Hb_001571_060 Hb_001571_060 Hb_002486_080--Hb_001571_060 Hb_000703_330 Hb_000703_330 Hb_007416_070--Hb_000703_330 Hb_000683_050 Hb_000683_050 Hb_007416_070--Hb_000683_050 Hb_000009_060 Hb_000009_060 Hb_007416_070--Hb_000009_060 Hb_000197_190 Hb_000197_190 Hb_007416_070--Hb_000197_190 Hb_000367_180 Hb_000367_180 Hb_007416_070--Hb_000367_180 Hb_001811_170 Hb_001811_170 Hb_007416_070--Hb_001811_170 Hb_000365_010--Hb_000909_080 Hb_000365_010--Hb_000358_020 Hb_001141_240 Hb_001141_240 Hb_000365_010--Hb_001141_240 Hb_011224_050 Hb_011224_050 Hb_000365_010--Hb_011224_050 Hb_180378_010 Hb_180378_010 Hb_005016_010--Hb_180378_010 Hb_000258_050 Hb_000258_050 Hb_005016_010--Hb_000258_050 Hb_002615_030 Hb_002615_030 Hb_005016_010--Hb_002615_030 Hb_010390_010 Hb_010390_010 Hb_005016_010--Hb_010390_010 Hb_177215_030 Hb_177215_030 Hb_005016_010--Hb_177215_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.753421 2.77289 3.51442 6.5073 0.970322 1.79396
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.07783 2.70528 1.43602 5.86631 6.3181

CAGE analysis