Hb_001951_070

Information

Type -
Description -
Location Contig1951: 47761-65117
Sequence    

Annotation

kegg
ID pop:POPTR_0001s34550g
description POPTRDRAFT_173703; hypothetical protein
nr
ID CAA16792.1
description putative protein [Arabidopsis thaliana]
swissprot
ID O49726
description Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2
trembl
ID A0A0E0KUG8
description Uncharacterized protein OS=Oryza punctata PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable purine permease 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19475: 55160-56022 , PASA_asmbl_19477: 63296-64468
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001951_070 0.0 - - putative protein [Arabidopsis thaliana]
2 Hb_001430_100 0.1210582537 - - cytochrome P450, putative [Ricinus communis]
3 Hb_000997_290 0.1402298631 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
4 Hb_000066_040 0.1431837301 - - PREDICTED: CDPK-related kinase 7-like [Populus euphratica]
5 Hb_001821_060 0.1461713742 - - PREDICTED: C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Jatropha curcas]
6 Hb_009193_010 0.1508056889 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
7 Hb_000445_370 0.1537347393 - - PREDICTED: probable methyltransferase PMT24 [Jatropha curcas]
8 Hb_000438_020 0.1655774833 - - leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus communis]
9 Hb_002603_010 0.1657160591 - - unnamed protein product [Vitis vinifera]
10 Hb_001269_520 0.1661845971 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
11 Hb_010381_020 0.1688514817 - - Endosomal P24A protein precursor, putative [Ricinus communis]
12 Hb_000996_160 0.1690214873 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000270_710 0.1695791442 - - PREDICTED: WAT1-related protein At5g40240-like isoform X1 [Jatropha curcas]
14 Hb_001538_020 0.1698906611 - - PREDICTED: uncharacterized protein LOC105629608 [Jatropha curcas]
15 Hb_001221_390 0.1703459471 - - Phospholipase C 4 precursor, putative [Ricinus communis]
16 Hb_102763_010 0.1705058052 - - PREDICTED: heat shock cognate protein 80 [Jatropha curcas]
17 Hb_001496_120 0.1705805078 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
18 Hb_000473_030 0.1705815776 - - hypothetical protein JCGZ_19297 [Jatropha curcas]
19 Hb_000270_830 0.1713757407 - - aldehyde dehydrogenase, putative [Ricinus communis]
20 Hb_001307_200 0.1715289794 - - PREDICTED: uncharacterized protein LOC105644489 [Jatropha curcas]

Gene co-expression network

sample Hb_001951_070 Hb_001951_070 Hb_001430_100 Hb_001430_100 Hb_001951_070--Hb_001430_100 Hb_000997_290 Hb_000997_290 Hb_001951_070--Hb_000997_290 Hb_000066_040 Hb_000066_040 Hb_001951_070--Hb_000066_040 Hb_001821_060 Hb_001821_060 Hb_001951_070--Hb_001821_060 Hb_009193_010 Hb_009193_010 Hb_001951_070--Hb_009193_010 Hb_000445_370 Hb_000445_370 Hb_001951_070--Hb_000445_370 Hb_005000_090 Hb_005000_090 Hb_001430_100--Hb_005000_090 Hb_001446_060 Hb_001446_060 Hb_001430_100--Hb_001446_060 Hb_102763_010 Hb_102763_010 Hb_001430_100--Hb_102763_010 Hb_000227_320 Hb_000227_320 Hb_001430_100--Hb_000227_320 Hb_010381_020 Hb_010381_020 Hb_001430_100--Hb_010381_020 Hb_001195_370 Hb_001195_370 Hb_000997_290--Hb_001195_370 Hb_000997_290--Hb_009193_010 Hb_000329_080 Hb_000329_080 Hb_000997_290--Hb_000329_080 Hb_000997_290--Hb_000066_040 Hb_001425_010 Hb_001425_010 Hb_000997_290--Hb_001425_010 Hb_011174_080 Hb_011174_080 Hb_000997_290--Hb_011174_080 Hb_000066_040--Hb_009193_010 Hb_002805_090 Hb_002805_090 Hb_000066_040--Hb_002805_090 Hb_001109_160 Hb_001109_160 Hb_000066_040--Hb_001109_160 Hb_000665_200 Hb_000665_200 Hb_000066_040--Hb_000665_200 Hb_000025_500 Hb_000025_500 Hb_000066_040--Hb_000025_500 Hb_004041_030 Hb_004041_030 Hb_000066_040--Hb_004041_030 Hb_012033_010 Hb_012033_010 Hb_001821_060--Hb_012033_010 Hb_013968_010 Hb_013968_010 Hb_001821_060--Hb_013968_010 Hb_001821_060--Hb_009193_010 Hb_000256_160 Hb_000256_160 Hb_001821_060--Hb_000256_160 Hb_025045_010 Hb_025045_010 Hb_001821_060--Hb_025045_010 Hb_003226_090 Hb_003226_090 Hb_001821_060--Hb_003226_090 Hb_009193_010--Hb_000256_160 Hb_000510_190 Hb_000510_190 Hb_009193_010--Hb_000510_190 Hb_000414_080 Hb_000414_080 Hb_009193_010--Hb_000414_080 Hb_003582_090 Hb_003582_090 Hb_000445_370--Hb_003582_090 Hb_035834_010 Hb_035834_010 Hb_000445_370--Hb_035834_010 Hb_006916_030 Hb_006916_030 Hb_000445_370--Hb_006916_030 Hb_000445_370--Hb_000066_040 Hb_000167_040 Hb_000167_040 Hb_000445_370--Hb_000167_040 Hb_000445_370--Hb_009193_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.745033 1.82508 1.7726 2.49453 0.696025 0.0623707
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.147695 0.0871714 0.371447 2.26466 3.66736

CAGE analysis