Hb_001951_240

Information

Type -
Description -
Location Contig1951: 208287-215452
Sequence    

Annotation

kegg
ID vvi:100246862
description protein MEI2-like 5
nr
ID XP_012091883.1
description PREDICTED: protein MEI2-like 5 [Jatropha curcas]
swissprot
ID Q6ZI17
description Protein MEI2-like 2 OS=Oryza sativa subsp. japonica GN=ML2 PE=2 SV=1
trembl
ID A0A067JBP2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21668 PE=4 SV=1
Gene Ontology
ID GO:0000166
description protein mei2-like 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19517: 208367-215320
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001951_240 0.0 - - PREDICTED: protein MEI2-like 5 [Jatropha curcas]
2 Hb_000732_230 0.0929975928 - - PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X1 [Jatropha curcas]
3 Hb_172421_010 0.0931064616 - - cysteine protease [Hevea brasiliensis]
4 Hb_001053_200 0.0999133995 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
5 Hb_000649_300 0.1041347415 transcription factor TF Family: Tify JAZ9 [Hevea brasiliensis]
6 Hb_002804_010 0.1069399949 - - PREDICTED: U-box domain-containing protein 33-like [Jatropha curcas]
7 Hb_002073_020 0.1118731353 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
8 Hb_005496_160 0.1144642625 - - PREDICTED: calcium-transporting ATPase 1, chloroplastic [Jatropha curcas]
9 Hb_000613_220 0.1145572322 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
10 Hb_019863_060 0.1155806379 - - PREDICTED: target of Myb protein 1-like [Populus euphratica]
11 Hb_000950_040 0.1159747449 - - cation-transporting atpase plant, putative [Ricinus communis]
12 Hb_005000_050 0.1178609414 - - PREDICTED: tetraspanin-2 [Jatropha curcas]
13 Hb_001102_090 0.1195340796 - - PREDICTED: mitogen-activated protein kinase 19 [Jatropha curcas]
14 Hb_002874_170 0.1199901498 - - PREDICTED: L-arabinokinase-like isoform X3 [Jatropha curcas]
15 Hb_172676_010 0.1217317632 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
16 Hb_005288_050 0.1222831541 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase SUVR4 [Jatropha curcas]
17 Hb_003752_120 0.1254563494 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Jatropha curcas]
18 Hb_007031_040 0.1260303678 transcription factor TF Family: bZIP PREDICTED: bZIP transcription factor 17-like [Jatropha curcas]
19 Hb_001662_170 0.1266210689 - - PREDICTED: phospholipase D delta-like [Jatropha curcas]
20 Hb_001408_020 0.1288010632 - - PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_001951_240 Hb_001951_240 Hb_000732_230 Hb_000732_230 Hb_001951_240--Hb_000732_230 Hb_172421_010 Hb_172421_010 Hb_001951_240--Hb_172421_010 Hb_001053_200 Hb_001053_200 Hb_001951_240--Hb_001053_200 Hb_000649_300 Hb_000649_300 Hb_001951_240--Hb_000649_300 Hb_002804_010 Hb_002804_010 Hb_001951_240--Hb_002804_010 Hb_002073_020 Hb_002073_020 Hb_001951_240--Hb_002073_020 Hb_000950_040 Hb_000950_040 Hb_000732_230--Hb_000950_040 Hb_115513_040 Hb_115513_040 Hb_000732_230--Hb_115513_040 Hb_001408_020 Hb_001408_020 Hb_000732_230--Hb_001408_020 Hb_000227_320 Hb_000227_320 Hb_000732_230--Hb_000227_320 Hb_003050_150 Hb_003050_150 Hb_000732_230--Hb_003050_150 Hb_004324_060 Hb_004324_060 Hb_172421_010--Hb_004324_060 Hb_002248_120 Hb_002248_120 Hb_172421_010--Hb_002248_120 Hb_004994_300 Hb_004994_300 Hb_172421_010--Hb_004994_300 Hb_007313_070 Hb_007313_070 Hb_172421_010--Hb_007313_070 Hb_013405_180 Hb_013405_180 Hb_172421_010--Hb_013405_180 Hb_008103_100 Hb_008103_100 Hb_001053_200--Hb_008103_100 Hb_001662_170 Hb_001662_170 Hb_001053_200--Hb_001662_170 Hb_001053_200--Hb_000649_300 Hb_005496_160 Hb_005496_160 Hb_001053_200--Hb_005496_160 Hb_004032_310 Hb_004032_310 Hb_001053_200--Hb_004032_310 Hb_000649_300--Hb_005496_160 Hb_002874_170 Hb_002874_170 Hb_000649_300--Hb_002874_170 Hb_002910_010 Hb_002910_010 Hb_000649_300--Hb_002910_010 Hb_000649_300--Hb_002073_020 Hb_005288_050 Hb_005288_050 Hb_002804_010--Hb_005288_050 Hb_002387_040 Hb_002387_040 Hb_002804_010--Hb_002387_040 Hb_000418_050 Hb_000418_050 Hb_002804_010--Hb_000418_050 Hb_024714_070 Hb_024714_070 Hb_002804_010--Hb_024714_070 Hb_000753_140 Hb_000753_140 Hb_002804_010--Hb_000753_140 Hb_005539_100 Hb_005539_100 Hb_002073_020--Hb_005539_100 Hb_172676_010 Hb_172676_010 Hb_002073_020--Hb_172676_010 Hb_002073_020--Hb_001053_200 Hb_002073_020--Hb_005496_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.44335 56.914 27.8325 26.8897 7.48038 6.79987
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.19012 1.86756 2.08883 16.541 20.4318

CAGE analysis