Hb_001957_010

Information

Type -
Description -
Location Contig1957: 4971-8794
Sequence    

Annotation

kegg
ID pop:POPTR_0001s40490g
description phosphate translocator-related family protein
nr
ID XP_012087691.1
description PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 isoform X1 [Jatropha curcas]
swissprot
ID Q94EI9
description Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1
trembl
ID A0A067JL85
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25712 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable sugar phosphate phosphate translocator at3g14410

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19593: 4993-8743
cDNA
(Sanger)
(ID:Location)		 021_M23.ab1: 4993-7141

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001957_010 0.0 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 isoform X1 [Jatropha curcas]
2 Hb_065968_010 0.0722565212 - - PREDICTED: probable glycosyltransferase At3g07620 isoform X2 [Jatropha curcas]
3 Hb_003605_020 0.0728934949 - - exocyst complex component sec6, putative [Ricinus communis]
4 Hb_000197_190 0.0778468328 - - PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like [Jatropha curcas]
5 Hb_001507_120 0.0796758248 - - transcription factor, putative [Ricinus communis]
6 Hb_000395_280 0.0801128622 - - PREDICTED: thioredoxin-related transmembrane protein 2 [Vitis vinifera]
7 Hb_003994_030 0.0816281611 - - PREDICTED: organic cation/carnitine transporter 7 [Jatropha curcas]
8 Hb_002686_200 0.0817326873 - - glucosidase II beta subunit, putative [Ricinus communis]
9 Hb_002093_060 0.0838627755 - - phosphoprotein phosphatase, putative [Ricinus communis]
10 Hb_005701_120 0.0847823092 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Cucumis sativus]
11 Hb_003998_040 0.0856245234 - - organic anion transporter, putative [Ricinus communis]
12 Hb_001633_080 0.0861721882 - - PREDICTED: V-type proton ATPase subunit C [Gossypium raimondii]
13 Hb_003159_050 0.0885883298 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial isoform X1 [Jatropha curcas]
14 Hb_000120_370 0.0896563758 - - type 2 diacylglycerol acyltransferase [Ricinus communis]
15 Hb_010407_140 0.0901474637 - - PREDICTED: malate dehydrogenase [Jatropha curcas]
16 Hb_000367_180 0.091056759 - - Heparanase-2, putative [Ricinus communis]
17 Hb_012733_040 0.0916951916 - - ATP-dependent clp protease ATP-binding subunit clpx, putative [Ricinus communis]
18 Hb_170138_010 0.09361677 - - conserved hypothetical protein [Ricinus communis]
19 Hb_012393_030 0.0937288143 - - NADP-dependent isocitrate dehydrogenase family protein [Populus trichocarpa]
20 Hb_001703_050 0.0937485872 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_001957_010 Hb_001957_010 Hb_065968_010 Hb_065968_010 Hb_001957_010--Hb_065968_010 Hb_003605_020 Hb_003605_020 Hb_001957_010--Hb_003605_020 Hb_000197_190 Hb_000197_190 Hb_001957_010--Hb_000197_190 Hb_001507_120 Hb_001507_120 Hb_001957_010--Hb_001507_120 Hb_000395_280 Hb_000395_280 Hb_001957_010--Hb_000395_280 Hb_003994_030 Hb_003994_030 Hb_001957_010--Hb_003994_030 Hb_002686_200 Hb_002686_200 Hb_065968_010--Hb_002686_200 Hb_065968_010--Hb_003605_020 Hb_159809_070 Hb_159809_070 Hb_065968_010--Hb_159809_070 Hb_002552_040 Hb_002552_040 Hb_065968_010--Hb_002552_040 Hb_074197_040 Hb_074197_040 Hb_065968_010--Hb_074197_040 Hb_003605_020--Hb_000395_280 Hb_000174_260 Hb_000174_260 Hb_003605_020--Hb_000174_260 Hb_001269_130 Hb_001269_130 Hb_003605_020--Hb_001269_130 Hb_019654_020 Hb_019654_020 Hb_003605_020--Hb_019654_020 Hb_001799_060 Hb_001799_060 Hb_000197_190--Hb_001799_060 Hb_000197_190--Hb_065968_010 Hb_000703_330 Hb_000703_330 Hb_000197_190--Hb_000703_330 Hb_000009_060 Hb_000009_060 Hb_000197_190--Hb_000009_060 Hb_007416_070 Hb_007416_070 Hb_000197_190--Hb_007416_070 Hb_001633_200 Hb_001633_200 Hb_001507_120--Hb_001633_200 Hb_001507_120--Hb_065968_010 Hb_001507_120--Hb_000395_280 Hb_003777_200 Hb_003777_200 Hb_001507_120--Hb_003777_200 Hb_000260_510 Hb_000260_510 Hb_001507_120--Hb_000260_510 Hb_005754_040 Hb_005754_040 Hb_000395_280--Hb_005754_040 Hb_000395_280--Hb_065968_010 Hb_000395_280--Hb_002552_040 Hb_001227_120 Hb_001227_120 Hb_000395_280--Hb_001227_120 Hb_003207_020 Hb_003207_020 Hb_003994_030--Hb_003207_020 Hb_021943_090 Hb_021943_090 Hb_003994_030--Hb_021943_090 Hb_002110_100 Hb_002110_100 Hb_003994_030--Hb_002110_100 Hb_002193_060 Hb_002193_060 Hb_003994_030--Hb_002193_060 Hb_005701_120 Hb_005701_120 Hb_003994_030--Hb_005701_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.1267 2.12075 7.60164 12.0775 3.26628 3.70499
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.20559 4.57975 5.20611 9.03241 8.10014

CAGE analysis