Hb_001969_130

Information

Type -
Description -
Location Contig1969: 155447-156832
Sequence    

Annotation

kegg
ID rcu:RCOM_0896860
description sulfate transporter, putative
nr
ID XP_012073275.1
description PREDICTED: molybdate transporter 2 [Jatropha curcas]
swissprot
ID Q0WP36
description Molybdate transporter 2 OS=Arabidopsis thaliana GN=MOT2 PE=1 SV=2
trembl
ID A0A067KZ93
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06215 PE=4 SV=1
Gene Ontology
ID GO:0016021
description molybdate transporter 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001969_130 0.0 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
2 Hb_000665_200 0.0876625276 - - calcineurin-like phosphoesterase [Manihot esculenta]
3 Hb_001124_140 0.0929751699 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
4 Hb_002026_030 0.0943275038 desease resistance Gene Name: NB-ARC PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
5 Hb_022425_050 0.0997439539 - - PREDICTED: probable lactoylglutathione lyase, chloroplast isoform X1 [Jatropha curcas]
6 Hb_000066_040 0.1032304382 - - PREDICTED: CDPK-related kinase 7-like [Populus euphratica]
7 Hb_001221_300 0.1064957718 - - PREDICTED: acetolactate synthase 3, chloroplastic [Jatropha curcas]
8 Hb_001865_010 0.107225844 transcription factor TF Family: B3 hypothetical protein RCOM_0465210 [Ricinus communis]
9 Hb_005695_080 0.1120592256 - - PREDICTED: acetyl-CoA carboxylase 1-like [Jatropha curcas]
10 Hb_025045_010 0.1202847813 - - catalytic, putative [Ricinus communis]
11 Hb_000416_060 0.1204608139 - - PREDICTED: uncharacterized protein LOC105649718 [Jatropha curcas]
12 Hb_004041_030 0.1228019186 - - PREDICTED: mitochondrial substrate carrier family protein C-like isoform X1 [Populus euphratica]
13 Hb_001195_370 0.1232944037 - - -
14 Hb_000800_010 0.1240235226 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
15 Hb_004052_110 0.1250289968 - - PREDICTED: host cell factor 2 isoform X1 [Jatropha curcas]
16 Hb_020400_020 0.1255804383 - - starch synthase isoform II [Manihot esculenta]
17 Hb_000977_150 0.1276188854 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
18 Hb_005588_120 0.1278190069 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001109_160 0.129267167 - - DNA binding protein, putative [Ricinus communis]
20 Hb_002835_280 0.1294603382 - - PREDICTED: L-type lectin-domain containing receptor kinase S.1 [Jatropha curcas]

Gene co-expression network

sample Hb_001969_130 Hb_001969_130 Hb_000665_200 Hb_000665_200 Hb_001969_130--Hb_000665_200 Hb_001124_140 Hb_001124_140 Hb_001969_130--Hb_001124_140 Hb_002026_030 Hb_002026_030 Hb_001969_130--Hb_002026_030 Hb_022425_050 Hb_022425_050 Hb_001969_130--Hb_022425_050 Hb_000066_040 Hb_000066_040 Hb_001969_130--Hb_000066_040 Hb_001221_300 Hb_001221_300 Hb_001969_130--Hb_001221_300 Hb_000665_200--Hb_002026_030 Hb_001865_100 Hb_001865_100 Hb_000665_200--Hb_001865_100 Hb_004052_110 Hb_004052_110 Hb_000665_200--Hb_004052_110 Hb_000665_200--Hb_001221_300 Hb_000665_200--Hb_000066_040 Hb_005731_100 Hb_005731_100 Hb_001124_140--Hb_005731_100 Hb_001124_140--Hb_022425_050 Hb_001124_140--Hb_002026_030 Hb_001865_010 Hb_001865_010 Hb_001124_140--Hb_001865_010 Hb_004129_010 Hb_004129_010 Hb_001124_140--Hb_004129_010 Hb_002026_030--Hb_004052_110 Hb_002675_080 Hb_002675_080 Hb_002026_030--Hb_002675_080 Hb_004678_010 Hb_004678_010 Hb_002026_030--Hb_004678_010 Hb_022425_050--Hb_001865_010 Hb_022425_050--Hb_005731_100 Hb_004223_270 Hb_004223_270 Hb_022425_050--Hb_004223_270 Hb_000334_050 Hb_000334_050 Hb_022425_050--Hb_000334_050 Hb_009193_010 Hb_009193_010 Hb_000066_040--Hb_009193_010 Hb_002805_090 Hb_002805_090 Hb_000066_040--Hb_002805_090 Hb_001109_160 Hb_001109_160 Hb_000066_040--Hb_001109_160 Hb_000025_500 Hb_000025_500 Hb_000066_040--Hb_000025_500 Hb_004041_030 Hb_004041_030 Hb_000066_040--Hb_004041_030 Hb_000369_080 Hb_000369_080 Hb_001221_300--Hb_000369_080 Hb_001221_300--Hb_000025_500 Hb_001221_300--Hb_004041_030 Hb_001439_070 Hb_001439_070 Hb_001221_300--Hb_001439_070 Hb_000376_210 Hb_000376_210 Hb_001221_300--Hb_000376_210 Hb_021079_020 Hb_021079_020 Hb_001221_300--Hb_021079_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.97465 12.614 10.2766 12.5797 1.14874 1.69608
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.29297 2.23463 1.91605 7.19777 24.2479

CAGE analysis