Hb_001976_090

Information

Type -
Description -
Location Contig1976: 93358-93999
Sequence    

Annotation

kegg
ID rcu:RCOM_0020960
description hypothetical protein
nr
ID XP_012081679.1
description PREDICTED: uncharacterized protein LOC105641696 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KC17
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18710 PE=4 SV=1
Gene Ontology
ID GO:0005515
description tetratricopeptide repeat -like superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19860: 93607-94201
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001976_090 0.0 - - PREDICTED: uncharacterized protein LOC105641696 [Jatropha curcas]
2 Hb_010180_040 0.0921527754 - - PREDICTED: prosaposin isoform X1 [Jatropha curcas]
3 Hb_000331_160 0.0963403529 - - adenylate kinase 1 chloroplast, putative [Ricinus communis]
4 Hb_005494_020 0.1079768479 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
5 Hb_080313_010 0.109191221 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
6 Hb_000376_090 0.1107901055 - - Myosin heavy chain, fast skeletal muscle, embryonic, putative [Ricinus communis]
7 Hb_176152_010 0.1108674978 - - Myosin heavy chain, fast skeletal muscle, embryonic, putative [Ricinus communis]
8 Hb_000813_100 0.1133851137 - - PREDICTED: uncharacterized protein LOC105631583 isoform X2 [Jatropha curcas]
9 Hb_004586_180 0.1163520089 - - hypothetical protein JCGZ_15866 [Jatropha curcas]
10 Hb_006132_100 0.1164901719 - - PREDICTED: uncharacterized protein LOC105642968 [Jatropha curcas]
11 Hb_000213_070 0.1165584704 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 [Jatropha curcas]
12 Hb_164010_060 0.1168382684 - - PREDICTED: uncharacterized protein LOC105633115 [Jatropha curcas]
13 Hb_000027_030 0.1179535797 - - Uncharacterized protein isoform 1 [Theobroma cacao]
14 Hb_001492_010 0.1185000259 - - PREDICTED: diacylglycerol kinase 3-like isoform X2 [Populus euphratica]
15 Hb_003299_070 0.1189046742 - - AMP deaminase [Theobroma cacao]
16 Hb_027028_020 0.1192096774 - - PREDICTED: uncharacterized protein LOC105633192 [Jatropha curcas]
17 Hb_003747_010 0.1197199628 - - hypothetical protein JCGZ_24080 [Jatropha curcas]
18 Hb_000594_020 0.1198075268 - - PREDICTED: mediator of RNA polymerase II transcription subunit 25 isoform X2 [Jatropha curcas]
19 Hb_002960_160 0.119837781 - - PREDICTED: vacuolar protein sorting-associated protein 35B isoform X2 [Jatropha curcas]
20 Hb_000120_610 0.1218346254 - - mitotic control protein dis3, putative [Ricinus communis]

Gene co-expression network

sample Hb_001976_090 Hb_001976_090 Hb_010180_040 Hb_010180_040 Hb_001976_090--Hb_010180_040 Hb_000331_160 Hb_000331_160 Hb_001976_090--Hb_000331_160 Hb_005494_020 Hb_005494_020 Hb_001976_090--Hb_005494_020 Hb_080313_010 Hb_080313_010 Hb_001976_090--Hb_080313_010 Hb_000376_090 Hb_000376_090 Hb_001976_090--Hb_000376_090 Hb_176152_010 Hb_176152_010 Hb_001976_090--Hb_176152_010 Hb_008714_020 Hb_008714_020 Hb_010180_040--Hb_008714_020 Hb_010180_040--Hb_005494_020 Hb_015763_030 Hb_015763_030 Hb_010180_040--Hb_015763_030 Hb_000347_130 Hb_000347_130 Hb_010180_040--Hb_000347_130 Hb_000046_450 Hb_000046_450 Hb_010180_040--Hb_000046_450 Hb_000160_220 Hb_000160_220 Hb_010180_040--Hb_000160_220 Hb_000640_020 Hb_000640_020 Hb_000331_160--Hb_000640_020 Hb_032202_240 Hb_032202_240 Hb_000331_160--Hb_032202_240 Hb_002326_020 Hb_002326_020 Hb_000331_160--Hb_002326_020 Hb_023020_060 Hb_023020_060 Hb_000331_160--Hb_023020_060 Hb_001492_010 Hb_001492_010 Hb_000331_160--Hb_001492_010 Hb_000504_160 Hb_000504_160 Hb_000331_160--Hb_000504_160 Hb_000567_010 Hb_000567_010 Hb_005494_020--Hb_000567_010 Hb_029142_010 Hb_029142_010 Hb_005494_020--Hb_029142_010 Hb_003935_030 Hb_003935_030 Hb_005494_020--Hb_003935_030 Hb_002960_160 Hb_002960_160 Hb_005494_020--Hb_002960_160 Hb_003428_070 Hb_003428_070 Hb_005494_020--Hb_003428_070 Hb_005494_020--Hb_000347_130 Hb_012023_020 Hb_012023_020 Hb_080313_010--Hb_012023_020 Hb_001140_350 Hb_001140_350 Hb_080313_010--Hb_001140_350 Hb_005503_040 Hb_005503_040 Hb_080313_010--Hb_005503_040 Hb_063716_080 Hb_063716_080 Hb_080313_010--Hb_063716_080 Hb_003747_010 Hb_003747_010 Hb_080313_010--Hb_003747_010 Hb_001454_320 Hb_001454_320 Hb_080313_010--Hb_001454_320 Hb_000376_090--Hb_176152_010 Hb_001501_060 Hb_001501_060 Hb_000376_090--Hb_001501_060 Hb_000209_070 Hb_000209_070 Hb_000376_090--Hb_000209_070 Hb_000329_090 Hb_000329_090 Hb_000376_090--Hb_000329_090 Hb_000025_650 Hb_000025_650 Hb_000376_090--Hb_000025_650 Hb_000347_280 Hb_000347_280 Hb_176152_010--Hb_000347_280 Hb_000335_010 Hb_000335_010 Hb_176152_010--Hb_000335_010 Hb_176152_010--Hb_000329_090 Hb_004586_180 Hb_004586_180 Hb_176152_010--Hb_004586_180 Hb_001863_110 Hb_001863_110 Hb_176152_010--Hb_001863_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
33.1894 23.944 4.22938 17.6521 32.8068 35.2547
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.1984 7.83501 5.71094 16.8274 6.60532

CAGE analysis