Hb_001989_100

Information

Type -
Description -
Location Contig1989: 181154-181789
Sequence    

Annotation

kegg
ID rcu:RCOM_1536980
description serine-type endopeptidase inhibitor, putative
nr
ID XP_012074815.1
description PREDICTED: uncharacterized protein LOC105636214 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LBZ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14923 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001989_100 0.0 - - PREDICTED: uncharacterized protein LOC105636214 [Jatropha curcas]
2 Hb_000300_410 0.1457248099 - - hypothetical protein POPTR_0013s05860g [Populus trichocarpa]
3 Hb_012707_010 0.155452217 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
4 Hb_000950_030 0.1683161068 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g10290 [Nelumbo nucifera]
5 Hb_020805_140 0.1698959623 - - PREDICTED: F-box/kelch-repeat protein At5g42360-like [Jatropha curcas]
6 Hb_000496_110 0.1845852369 - - PREDICTED: uncharacterized protein LOC105650214 [Jatropha curcas]
7 Hb_005976_010 0.1896347 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Jatropha curcas]
8 Hb_032143_020 0.1938486939 - - hypothetical protein POPTR_0009s06310g [Populus trichocarpa]
9 Hb_069355_010 0.1988514523 - - NBS-LRR resistance protein RGH2 [Manihot esculenta]
10 Hb_004055_020 0.1995920105 - - PREDICTED: uncharacterized protein LOC105631433 [Jatropha curcas]
11 Hb_048384_010 0.2004570956 - - PREDICTED: probable receptor-like protein kinase At2g42960 [Cucumis sativus]
12 Hb_008695_220 0.2022010375 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
13 Hb_001486_350 0.2025638355 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
14 Hb_002157_270 0.2081156435 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
15 Hb_001635_010 0.2081438586 - - -
16 Hb_000210_100 0.209071221 - - pepsin A, putative [Ricinus communis]
17 Hb_000260_280 0.2096671776 - - auxin:hydrogen symporter, putative [Ricinus communis]
18 Hb_000094_200 0.2101181989 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000192_020 0.211188407 - - hypothetical protein JCGZ_17351 [Jatropha curcas]
20 Hb_000806_130 0.2124183644 - - Adenosine kinase 2 [Theobroma cacao]

Gene co-expression network

sample Hb_001989_100 Hb_001989_100 Hb_000300_410 Hb_000300_410 Hb_001989_100--Hb_000300_410 Hb_012707_010 Hb_012707_010 Hb_001989_100--Hb_012707_010 Hb_000950_030 Hb_000950_030 Hb_001989_100--Hb_000950_030 Hb_020805_140 Hb_020805_140 Hb_001989_100--Hb_020805_140 Hb_000496_110 Hb_000496_110 Hb_001989_100--Hb_000496_110 Hb_005976_010 Hb_005976_010 Hb_001989_100--Hb_005976_010 Hb_002157_270 Hb_002157_270 Hb_000300_410--Hb_002157_270 Hb_000300_410--Hb_012707_010 Hb_015675_030 Hb_015675_030 Hb_000300_410--Hb_015675_030 Hb_000300_410--Hb_000950_030 Hb_011310_040 Hb_011310_040 Hb_000300_410--Hb_011310_040 Hb_012707_010--Hb_000950_030 Hb_000696_070 Hb_000696_070 Hb_012707_010--Hb_000696_070 Hb_001486_350 Hb_001486_350 Hb_012707_010--Hb_001486_350 Hb_000806_130 Hb_000806_130 Hb_012707_010--Hb_000806_130 Hb_012707_010--Hb_002157_270 Hb_000950_030--Hb_002157_270 Hb_004055_020 Hb_004055_020 Hb_000950_030--Hb_004055_020 Hb_000950_030--Hb_000806_130 Hb_000950_030--Hb_001486_350 Hb_006634_110 Hb_006634_110 Hb_000950_030--Hb_006634_110 Hb_026527_010 Hb_026527_010 Hb_020805_140--Hb_026527_010 Hb_000107_350 Hb_000107_350 Hb_020805_140--Hb_000107_350 Hb_069355_010 Hb_069355_010 Hb_020805_140--Hb_069355_010 Hb_025466_020 Hb_025466_020 Hb_020805_140--Hb_025466_020 Hb_000345_080 Hb_000345_080 Hb_020805_140--Hb_000345_080 Hb_008699_030 Hb_008699_030 Hb_020805_140--Hb_008699_030 Hb_002316_080 Hb_002316_080 Hb_000496_110--Hb_002316_080 Hb_000246_130 Hb_000246_130 Hb_000496_110--Hb_000246_130 Hb_000496_110--Hb_000300_410 Hb_000496_110--Hb_011310_040 Hb_000496_110--Hb_000107_350 Hb_000115_250 Hb_000115_250 Hb_005976_010--Hb_000115_250 Hb_000580_110 Hb_000580_110 Hb_005976_010--Hb_000580_110 Hb_000236_180 Hb_000236_180 Hb_005976_010--Hb_000236_180 Hb_029223_040 Hb_029223_040 Hb_005976_010--Hb_029223_040 Hb_000438_120 Hb_000438_120 Hb_005976_010--Hb_000438_120 Hb_005976_010--Hb_012707_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.290381 0.0909641 0.578898 8.59786 0.194962 0.121011
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.563547 1.23993 1.53137 1.16774 2.70849

CAGE analysis