Hb_001999_140

Information

Type -
Description -
Location Contig1999: 147924-152577
Sequence    

Annotation

kegg
ID rcu:RCOM_0611770
description anthranilate synthase component I, putative (EC:4.1.3.27)
nr
ID XP_012067835.1
description PREDICTED: anthranilate synthase alpha subunit 2, chloroplastic isoform X2 [Jatropha curcas]
swissprot
ID P32069
description Anthranilate synthase alpha subunit 2, chloroplastic OS=Arabidopsis thaliana GN=ASA2 PE=2 SV=1
trembl
ID A0A067LPQ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08486 PE=4 SV=1
Gene Ontology
ID GO:0004049
description anthranilate synthase alpha subunit chloroplastic-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20033: 148006-149279
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001999_140 0.0 - - PREDICTED: anthranilate synthase alpha subunit 2, chloroplastic isoform X2 [Jatropha curcas]
2 Hb_000826_070 0.0549352178 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000664_120 0.0658595911 - - PREDICTED: SART-1 family protein DOT2 isoform X1 [Jatropha curcas]
4 Hb_013459_020 0.071477713 - - PREDICTED: uncharacterized protein LOC105628886 [Jatropha curcas]
5 Hb_001221_180 0.074074402 - - calcineurin-like phosphoesterase [Manihot esculenta]
6 Hb_003093_040 0.0749513378 - - PREDICTED: nucleolar complex protein 4 homolog isoform X1 [Jatropha curcas]
7 Hb_002357_070 0.0794187317 transcription factor TF Family: PHD PREDICTED: protein strawberry notch homolog 1 [Jatropha curcas]
8 Hb_000011_270 0.0798475279 - - PREDICTED: pumilio homolog 23 [Jatropha curcas]
9 Hb_001008_070 0.0805368843 - - PREDICTED: periodic tryptophan protein 2 homolog [Jatropha curcas]
10 Hb_002581_010 0.0857093935 - - PREDICTED: uncharacterized protein LOC105641469 isoform X2 [Jatropha curcas]
11 Hb_000934_210 0.0868451223 - - suppressor of ty, putative [Ricinus communis]
12 Hb_012022_060 0.0873427496 - - PREDICTED: uncharacterized protein LOC105646588 isoform X2 [Jatropha curcas]
13 Hb_000568_050 0.0894222799 - - PREDICTED: endoplasmic reticulum metallopeptidase 1 isoform X2 [Jatropha curcas]
14 Hb_000795_040 0.0905777054 - - PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X1 [Jatropha curcas]
15 Hb_017469_110 0.0923087106 - - PREDICTED: uncharacterized protein LOC105641795 [Jatropha curcas]
16 Hb_001953_120 0.0925544169 - - PREDICTED: uncharacterized protein LOC105648761 isoform X1 [Jatropha curcas]
17 Hb_000377_050 0.094292076 - - PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X1 [Jatropha curcas]
18 Hb_000009_030 0.0955406495 - - PREDICTED: splicing factor U2af large subunit B isoform X1 [Jatropha curcas]
19 Hb_005211_020 0.0967049867 - - PREDICTED: serine/threonine-protein kinase prpf4B-like isoform X1 [Jatropha curcas]
20 Hb_002968_070 0.0967939734 - - PREDICTED: transcription initiation factor TFIID subunit 4b isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001999_140 Hb_001999_140 Hb_000826_070 Hb_000826_070 Hb_001999_140--Hb_000826_070 Hb_000664_120 Hb_000664_120 Hb_001999_140--Hb_000664_120 Hb_013459_020 Hb_013459_020 Hb_001999_140--Hb_013459_020 Hb_001221_180 Hb_001221_180 Hb_001999_140--Hb_001221_180 Hb_003093_040 Hb_003093_040 Hb_001999_140--Hb_003093_040 Hb_002357_070 Hb_002357_070 Hb_001999_140--Hb_002357_070 Hb_000826_070--Hb_013459_020 Hb_000826_070--Hb_000664_120 Hb_005211_020 Hb_005211_020 Hb_000826_070--Hb_005211_020 Hb_000568_050 Hb_000568_050 Hb_000826_070--Hb_000568_050 Hb_012055_110 Hb_012055_110 Hb_000826_070--Hb_012055_110 Hb_005701_050 Hb_005701_050 Hb_000664_120--Hb_005701_050 Hb_000934_210 Hb_000934_210 Hb_000664_120--Hb_000934_210 Hb_000035_100 Hb_000035_100 Hb_000664_120--Hb_000035_100 Hb_002461_020 Hb_002461_020 Hb_000664_120--Hb_002461_020 Hb_017469_110 Hb_017469_110 Hb_013459_020--Hb_017469_110 Hb_011174_020 Hb_011174_020 Hb_013459_020--Hb_011174_020 Hb_002973_110 Hb_002973_110 Hb_013459_020--Hb_002973_110 Hb_001008_070 Hb_001008_070 Hb_013459_020--Hb_001008_070 Hb_001221_180--Hb_002357_070 Hb_000011_270 Hb_000011_270 Hb_001221_180--Hb_000011_270 Hb_019840_030 Hb_019840_030 Hb_001221_180--Hb_019840_030 Hb_060980_010 Hb_060980_010 Hb_001221_180--Hb_060980_010 Hb_001221_180--Hb_003093_040 Hb_001221_180--Hb_000568_050 Hb_003093_040--Hb_000011_270 Hb_000175_410 Hb_000175_410 Hb_003093_040--Hb_000175_410 Hb_002374_230 Hb_002374_230 Hb_003093_040--Hb_002374_230 Hb_000661_120 Hb_000661_120 Hb_003093_040--Hb_000661_120 Hb_007245_020 Hb_007245_020 Hb_002357_070--Hb_007245_020 Hb_123531_010 Hb_123531_010 Hb_002357_070--Hb_123531_010 Hb_002357_070--Hb_000934_210 Hb_000318_150 Hb_000318_150 Hb_002357_070--Hb_000318_150 Hb_002357_070--Hb_012055_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.4494 14.6478 14.2252 7.33432 8.63465 8.39352
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.59605 5.11999 3.95211 16.4531 20.219

CAGE analysis