Hb_002003_030

Information

Type -
Description -
Location Contig2003: 81986-101755
Sequence    

Annotation

kegg
ID rcu:RCOM_0100870
description UDP-glucosyltransferase, putative (EC:2.4.1.121)
nr
ID XP_012085630.1
description PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
swissprot
ID P0C7P7
description UDP-glycosyltransferase 74E1 OS=Arabidopsis thaliana GN=UGT74E1 PE=3 SV=1
trembl
ID A0A0E0M3G7
description Uncharacterized protein OS=Oryza punctata PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-xylose phenolic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20285: 82201-83633 , PASA_asmbl_20286: 89731-90569 , PASA_asmbl_20287: 100211-101878
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002003_030 0.0 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
2 Hb_116469_010 0.0726719284 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
3 Hb_150730_010 0.07556047 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
4 Hb_009778_050 0.0956446203 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
5 Hb_000057_180 0.0966061923 - - hypothetical protein POPTR_0001s18200g [Populus trichocarpa]
6 Hb_011861_020 0.1095762661 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06096 [Jatropha curcas]
7 Hb_000471_010 0.1133755028 - - ATP binding protein, putative [Ricinus communis]
8 Hb_005168_030 0.1146551743 - - unknown [Zea mays]
9 Hb_111985_120 0.1236278567 - - dihydroflavonol-4-reductase [Vitis rotundifolia]
10 Hb_106321_010 0.1246195984 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
11 Hb_006573_260 0.1258870312 - - -
12 Hb_028927_010 0.1276761733 - - leucine-rich repeat protein, putative [Ricinus communis]
13 Hb_000684_490 0.1289025739 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
14 Hb_004586_110 0.1315823946 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
15 Hb_004079_110 0.1398736033 - - PREDICTED: uncharacterized protein LOC100257802 [Vitis vinifera]
16 Hb_005730_070 0.1437314614 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 8 [Jatropha curcas]
17 Hb_002960_010 0.144914055 - - Zeamatin precursor, putative [Ricinus communis]
18 Hb_111985_160 0.1460601117 - - hypothetical protein B456_010G008900 [Gossypium raimondii]
19 Hb_000005_350 0.1465232006 - - PREDICTED: uncharacterized protein LOC105634263 [Jatropha curcas]
20 Hb_000705_090 0.1532301079 - - PREDICTED: uncharacterized protein LOC100246830 [Vitis vinifera]

Gene co-expression network

sample Hb_002003_030 Hb_002003_030 Hb_116469_010 Hb_116469_010 Hb_002003_030--Hb_116469_010 Hb_150730_010 Hb_150730_010 Hb_002003_030--Hb_150730_010 Hb_009778_050 Hb_009778_050 Hb_002003_030--Hb_009778_050 Hb_000057_180 Hb_000057_180 Hb_002003_030--Hb_000057_180 Hb_011861_020 Hb_011861_020 Hb_002003_030--Hb_011861_020 Hb_000471_010 Hb_000471_010 Hb_002003_030--Hb_000471_010 Hb_116469_010--Hb_011861_020 Hb_028927_010 Hb_028927_010 Hb_116469_010--Hb_028927_010 Hb_116469_010--Hb_150730_010 Hb_116469_010--Hb_000057_180 Hb_000005_350 Hb_000005_350 Hb_116469_010--Hb_000005_350 Hb_150730_010--Hb_011861_020 Hb_150730_010--Hb_000057_180 Hb_150730_010--Hb_009778_050 Hb_150730_010--Hb_000471_010 Hb_004079_110 Hb_004079_110 Hb_009778_050--Hb_004079_110 Hb_001723_070 Hb_001723_070 Hb_009778_050--Hb_001723_070 Hb_009778_050--Hb_116469_010 Hb_009778_050--Hb_011861_020 Hb_000057_180--Hb_011861_020 Hb_000057_180--Hb_028927_010 Hb_000057_180--Hb_000471_010 Hb_011861_020--Hb_000471_010 Hb_011861_020--Hb_000005_350 Hb_000684_490 Hb_000684_490 Hb_011861_020--Hb_000684_490 Hb_000471_010--Hb_000684_490 Hb_004586_110 Hb_004586_110 Hb_000471_010--Hb_004586_110 Hb_000471_010--Hb_116469_010 Hb_000471_010--Hb_000005_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.04312 8.53157 2.52585 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.00814182 0 16.2272 1.39661

CAGE analysis