Hb_002006_060

Information

Type -
Description -
Location Contig2006: 32368-32850
Sequence    

Annotation

kegg
ID fve:101294366
description oleosin 16 kDa-like
nr
ID XP_012092953.1
description PREDICTED: oleosin 1-like [Jatropha curcas]
swissprot
ID Q96543
description Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1
trembl
ID A0A067JBH4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05847 PE=4 SV=1
Gene Ontology
ID GO:0012511
description oleosin 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20335: 31417-31663 , PASA_asmbl_20336: 32700-32956
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002006_060 0.0 - - PREDICTED: oleosin 1-like [Jatropha curcas]
2 Hb_006618_020 0.138858581 - - Vacuolar-processing enzyme precursor [Ricinus communis]
3 Hb_006717_010 0.1425879613 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
4 Hb_001948_090 0.1481165011 transcription factor TF Family: GRAS hypothetical protein POPTR_0005s14540g [Populus trichocarpa]
5 Hb_005155_010 0.1487875609 - - amino acid transporter, putative [Ricinus communis]
6 Hb_061908_020 0.1494493392 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
7 Hb_172676_010 0.1512189575 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
8 Hb_001141_060 0.1555927417 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Jatropha curcas]
9 Hb_004605_020 0.156014832 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Jatropha curcas]
10 Hb_010055_020 0.1561546071 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
11 Hb_002010_080 0.1583728026 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
12 Hb_001391_100 0.1616834147 - - AMP dependent ligase, putative [Ricinus communis]
13 Hb_005271_180 0.1618398909 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
14 Hb_000369_070 0.162849014 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
15 Hb_000103_410 0.1659952189 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
16 Hb_001147_030 0.168887142 - - hypothetical protein JCGZ_14809 [Jatropha curcas]
17 Hb_027402_100 0.1698868282 transcription factor TF Family: C2C2-Dof hypothetical protein JCGZ_11638 [Jatropha curcas]
18 Hb_004907_070 0.1733377561 - - PREDICTED: protein phosphatase 2C 37 [Jatropha curcas]
19 Hb_167775_010 0.174657866 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
20 Hb_002739_070 0.1756602407 - - hypothetical protein B456_002G169900 [Gossypium raimondii]

Gene co-expression network

sample Hb_002006_060 Hb_002006_060 Hb_006618_020 Hb_006618_020 Hb_002006_060--Hb_006618_020 Hb_006717_010 Hb_006717_010 Hb_002006_060--Hb_006717_010 Hb_001948_090 Hb_001948_090 Hb_002006_060--Hb_001948_090 Hb_005155_010 Hb_005155_010 Hb_002006_060--Hb_005155_010 Hb_061908_020 Hb_061908_020 Hb_002006_060--Hb_061908_020 Hb_172676_010 Hb_172676_010 Hb_002006_060--Hb_172676_010 Hb_004605_020 Hb_004605_020 Hb_006618_020--Hb_004605_020 Hb_033312_090 Hb_033312_090 Hb_006618_020--Hb_033312_090 Hb_006618_020--Hb_061908_020 Hb_000522_130 Hb_000522_130 Hb_006618_020--Hb_000522_130 Hb_000369_070 Hb_000369_070 Hb_006618_020--Hb_000369_070 Hb_001195_250 Hb_001195_250 Hb_006717_010--Hb_001195_250 Hb_000567_240 Hb_000567_240 Hb_006717_010--Hb_000567_240 Hb_000103_410 Hb_000103_410 Hb_006717_010--Hb_000103_410 Hb_000589_420 Hb_000589_420 Hb_006717_010--Hb_000589_420 Hb_006717_010--Hb_001948_090 Hb_001141_060 Hb_001141_060 Hb_001948_090--Hb_001141_060 Hb_000320_270 Hb_000320_270 Hb_001948_090--Hb_000320_270 Hb_003912_080 Hb_003912_080 Hb_001948_090--Hb_003912_080 Hb_000230_470 Hb_000230_470 Hb_001948_090--Hb_000230_470 Hb_005408_100 Hb_005408_100 Hb_001948_090--Hb_005408_100 Hb_000753_120 Hb_000753_120 Hb_001948_090--Hb_000753_120 Hb_005155_010--Hb_061908_020 Hb_002609_130 Hb_002609_130 Hb_005155_010--Hb_002609_130 Hb_005155_010--Hb_004605_020 Hb_042463_060 Hb_042463_060 Hb_005155_010--Hb_042463_060 Hb_000321_120 Hb_000321_120 Hb_005155_010--Hb_000321_120 Hb_010261_030 Hb_010261_030 Hb_005155_010--Hb_010261_030 Hb_061908_020--Hb_004605_020 Hb_062229_010 Hb_062229_010 Hb_061908_020--Hb_062229_010 Hb_001391_100 Hb_001391_100 Hb_061908_020--Hb_001391_100 Hb_061908_020--Hb_172676_010 Hb_027337_030 Hb_027337_030 Hb_061908_020--Hb_027337_030 Hb_005539_100 Hb_005539_100 Hb_172676_010--Hb_005539_100 Hb_006052_060 Hb_006052_060 Hb_172676_010--Hb_006052_060 Hb_002073_020 Hb_002073_020 Hb_172676_010--Hb_002073_020 Hb_002874_170 Hb_002874_170 Hb_172676_010--Hb_002874_170 Hb_001951_240 Hb_001951_240 Hb_172676_010--Hb_001951_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.587978 7.61402 2.62497 3.4142 0.118175 0.803813
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.187787 1.25762 4.76322

CAGE analysis