Hb_002010_020

Information

Type -
Description -
Location Contig2010: 5144-5840
Sequence    

Annotation

kegg
ID crb:CARUB_v10015440mg
description hypothetical protein
nr
ID XP_012071319.1
description PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Jatropha curcas]
swissprot
ID O82385
description UDP-glycosyltransferase 71D2 OS=Arabidopsis thaliana GN=UGT71D2 PE=2 SV=1
trembl
ID R0HQX2
description Uncharacterized protein OS=Capsella rubella GN=CARUB_v10015440mg PE=3 SV=1
Gene Ontology
ID GO:0016757
description anthocyanidin 3-o-glucosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20430: 5430-19299
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002010_020 0.0 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Jatropha curcas]
2 Hb_154466_010 0.069018102 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
3 Hb_008202_020 0.0758525191 - - receptor serine/threonine kinase, putative [Ricinus communis]
4 Hb_002471_190 0.0911637729 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
5 Hb_002391_020 0.0915839271 transcription factor TF Family: NAC PREDICTED: putative NAC domain-containing protein 94 [Jatropha curcas]
6 Hb_004899_360 0.0985612661 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
7 Hb_001619_140 0.1002840783 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
8 Hb_004109_240 0.1164667367 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
9 Hb_001635_230 0.1217117511 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
10 Hb_002615_010 0.1225137084 - - Uncharacterized protein TCM_040942 [Theobroma cacao]
11 Hb_004880_100 0.122971678 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Glycine max]
12 Hb_158111_010 0.1261820811 - - S-locus-specific glycoprotein precursor, putative [Ricinus communis]
13 Hb_000359_260 0.1284450395 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
14 Hb_017693_040 0.1286516071 - - tyrosine kinase family protein [Medicago truncatula]
15 Hb_003077_060 0.1326110368 - - PREDICTED: 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like [Jatropha curcas]
16 Hb_077694_010 0.1333274018 - - uncharacterized protein LOC100305624 [Glycine max]
17 Hb_120011_010 0.1338359129 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
18 Hb_074672_010 0.1341400792 - - receptor serine/threonine kinase, putative [Ricinus communis]
19 Hb_002107_110 0.1342971246 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X1 [Jatropha curcas]
20 Hb_000087_200 0.1376464067 - - PREDICTED: uncharacterized protein LOC105641954 [Jatropha curcas]

Gene co-expression network

sample Hb_002010_020 Hb_002010_020 Hb_154466_010 Hb_154466_010 Hb_002010_020--Hb_154466_010 Hb_008202_020 Hb_008202_020 Hb_002010_020--Hb_008202_020 Hb_002471_190 Hb_002471_190 Hb_002010_020--Hb_002471_190 Hb_002391_020 Hb_002391_020 Hb_002010_020--Hb_002391_020 Hb_004899_360 Hb_004899_360 Hb_002010_020--Hb_004899_360 Hb_001619_140 Hb_001619_140 Hb_002010_020--Hb_001619_140 Hb_154466_010--Hb_002471_190 Hb_154466_010--Hb_002391_020 Hb_154466_010--Hb_001619_140 Hb_154466_010--Hb_008202_020 Hb_158111_010 Hb_158111_010 Hb_154466_010--Hb_158111_010 Hb_008202_020--Hb_004899_360 Hb_008202_020--Hb_001619_140 Hb_004109_240 Hb_004109_240 Hb_008202_020--Hb_004109_240 Hb_121540_010 Hb_121540_010 Hb_008202_020--Hb_121540_010 Hb_001635_230 Hb_001635_230 Hb_002471_190--Hb_001635_230 Hb_000087_200 Hb_000087_200 Hb_002471_190--Hb_000087_200 Hb_002471_190--Hb_004109_240 Hb_002471_190--Hb_158111_010 Hb_002391_020--Hb_158111_010 Hb_003119_030 Hb_003119_030 Hb_002391_020--Hb_003119_030 Hb_002391_020--Hb_002471_190 Hb_002391_020--Hb_001619_140 Hb_004899_360--Hb_004109_240 Hb_008810_030 Hb_008810_030 Hb_004899_360--Hb_008810_030 Hb_097007_020 Hb_097007_020 Hb_004899_360--Hb_097007_020 Hb_004899_360--Hb_001619_140 Hb_120011_010 Hb_120011_010 Hb_001619_140--Hb_120011_010 Hb_000571_030 Hb_000571_030 Hb_001619_140--Hb_000571_030 Hb_007858_020 Hb_007858_020 Hb_001619_140--Hb_007858_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.75568 2.57442 0.614026 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.463115 0.440306

CAGE analysis