Hb_002010_040

Information

Type -
Description -
Location Contig2010: 7773-12729
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002010_040 0.0 - - -
2 Hb_000007_290 0.0044771778 - - hypothetical protein AALP_AAs43195U000200 [Arabis alpina]
3 Hb_003647_070 0.0139559539 - - hypothetical protein POPTR_0006s09430g [Populus trichocarpa]
4 Hb_005474_070 0.0282186013 - - hypothetical protein JCGZ_10579 [Jatropha curcas]
5 Hb_002042_220 0.0364187779 - - Kinesin heavy chain, putative [Ricinus communis]
6 Hb_045260_010 0.0387500798 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
7 Hb_099263_010 0.0542790737 - - hypothetical protein AALP_AAs50029U000400 [Arabis alpina]
8 Hb_003058_150 0.0548283034 - - PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Jatropha curcas]
9 Hb_007534_080 0.0554279994 - - d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
10 Hb_000363_070 0.0599185385 - - conserved hypothetical protein [Ricinus communis]
11 Hb_034299_010 0.0717197486 - - F-box and wd40 domain protein, putative [Ricinus communis]
12 Hb_001097_110 0.0719066117 - - gibberellin 20-oxidase, putative [Ricinus communis]
13 Hb_000140_040 0.0737056887 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
14 Hb_000940_120 0.0740364992 - - PREDICTED: proline-rich protein 4-like isoform X2 [Pyrus x bretschneideri]
15 Hb_004197_030 0.074983128 - - hypothetical protein JCGZ_16263 [Jatropha curcas]
16 Hb_002960_180 0.0766212685 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
17 Hb_000540_080 0.0782408715 - - PREDICTED: laccase-17 [Jatropha curcas]
18 Hb_001140_110 0.0786768615 - - hypothetical protein JCGZ_26123 [Jatropha curcas]
19 Hb_003805_110 0.0792348112 - - PREDICTED: laccase-11-like [Jatropha curcas]
20 Hb_001051_020 0.0839359756 - - hypothetical protein L484_008044 [Morus notabilis]

Gene co-expression network

sample Hb_002010_040 Hb_002010_040 Hb_000007_290 Hb_000007_290 Hb_002010_040--Hb_000007_290 Hb_003647_070 Hb_003647_070 Hb_002010_040--Hb_003647_070 Hb_005474_070 Hb_005474_070 Hb_002010_040--Hb_005474_070 Hb_002042_220 Hb_002042_220 Hb_002010_040--Hb_002042_220 Hb_045260_010 Hb_045260_010 Hb_002010_040--Hb_045260_010 Hb_099263_010 Hb_099263_010 Hb_002010_040--Hb_099263_010 Hb_000007_290--Hb_003647_070 Hb_000007_290--Hb_005474_070 Hb_000007_290--Hb_002042_220 Hb_000007_290--Hb_045260_010 Hb_000007_290--Hb_099263_010 Hb_003647_070--Hb_005474_070 Hb_003647_070--Hb_045260_010 Hb_003647_070--Hb_002042_220 Hb_007534_080 Hb_007534_080 Hb_003647_070--Hb_007534_080 Hb_003058_150 Hb_003058_150 Hb_005474_070--Hb_003058_150 Hb_005474_070--Hb_002042_220 Hb_005474_070--Hb_007534_080 Hb_004197_030 Hb_004197_030 Hb_002042_220--Hb_004197_030 Hb_000940_120 Hb_000940_120 Hb_002042_220--Hb_000940_120 Hb_000363_070 Hb_000363_070 Hb_045260_010--Hb_000363_070 Hb_000540_080 Hb_000540_080 Hb_045260_010--Hb_000540_080 Hb_045260_010--Hb_099263_010 Hb_005991_030 Hb_005991_030 Hb_099263_010--Hb_005991_030 Hb_011108_010 Hb_011108_010 Hb_099263_010--Hb_011108_010 Hb_002960_180 Hb_002960_180 Hb_099263_010--Hb_002960_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.10745 9.08596 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 30.6217

CAGE analysis