Hb_002010_070

Information

Type -
Description -
Location Contig2010: 31806-32702
Sequence    

Annotation

kegg
ID fve:101311732
description probable receptor-like protein kinase At1g11050-like
nr
ID KCW57083.1
description hypothetical protein EUGRSUZ_I027342, partial [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059ATA1
description Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I027342 PE=4 SV=1
Gene Ontology
ID GO:0005622
description kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002010_070 0.0 - - hypothetical protein EUGRSUZ_I027342, partial [Eucalyptus grandis]
2 Hb_143629_200 0.0992688263 - - hypothetical protein POPTR_0013s00300g [Populus trichocarpa]
3 Hb_001706_020 0.1020137924 - - PREDICTED: organic cation/carnitine transporter 7 [Jatropha curcas]
4 Hb_001143_140 0.1117793998 - - Aldehyde dehydrogenase, putative [Ricinus communis]
5 Hb_060198_010 0.1139904435 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
6 Hb_144703_010 0.1171520187 - - Phospholipase A 2A, IIA,PLA2A [Theobroma cacao]
7 Hb_001174_030 0.1192123987 - - unnamed protein product [Vitis vinifera]
8 Hb_008092_020 0.120382837 - - transcription factor, putative [Ricinus communis]
9 Hb_000472_020 0.1206104728 - - PREDICTED: uncharacterized protein LOC105641103 [Jatropha curcas]
10 Hb_002344_080 0.1237481694 - - PREDICTED: protein YLS2-like [Populus euphratica]
11 Hb_000215_290 0.1253075809 transcription factor TF Family: NAC PREDICTED: protein BEARSKIN2 isoform X2 [Jatropha curcas]
12 Hb_000614_190 0.1260885376 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
13 Hb_002000_130 0.129006657 - - PREDICTED: abscisic stress-ripening protein 2-like [Eucalyptus grandis]
14 Hb_001013_050 0.1292337308 - - unnamed protein product [Coffea canephora]
15 Hb_000834_100 0.1295909325 - - PREDICTED: uncharacterized protein LOC105178355 [Sesamum indicum]
16 Hb_000342_020 0.1300653977 - - bel1 homeotic protein, putative [Ricinus communis]
17 Hb_003835_030 0.1309016314 - - glycosyltransferase, partial [Arabidopsis thaliana]
18 Hb_026144_030 0.1310676242 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
19 Hb_003226_030 0.1311289843 - - sucrose synthase 5 [Hevea brasiliensis]
20 Hb_005034_010 0.1311373665 - - alcohol dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_002010_070 Hb_002010_070 Hb_143629_200 Hb_143629_200 Hb_002010_070--Hb_143629_200 Hb_001706_020 Hb_001706_020 Hb_002010_070--Hb_001706_020 Hb_001143_140 Hb_001143_140 Hb_002010_070--Hb_001143_140 Hb_060198_010 Hb_060198_010 Hb_002010_070--Hb_060198_010 Hb_144703_010 Hb_144703_010 Hb_002010_070--Hb_144703_010 Hb_001174_030 Hb_001174_030 Hb_002010_070--Hb_001174_030 Hb_143629_200--Hb_001706_020 Hb_000215_290 Hb_000215_290 Hb_143629_200--Hb_000215_290 Hb_144449_010 Hb_144449_010 Hb_143629_200--Hb_144449_010 Hb_000868_130 Hb_000868_130 Hb_143629_200--Hb_000868_130 Hb_000959_010 Hb_000959_010 Hb_143629_200--Hb_000959_010 Hb_001706_020--Hb_000215_290 Hb_001706_020--Hb_001174_030 Hb_005488_030 Hb_005488_030 Hb_001706_020--Hb_005488_030 Hb_001544_070 Hb_001544_070 Hb_001706_020--Hb_001544_070 Hb_000472_020 Hb_000472_020 Hb_001706_020--Hb_000472_020 Hb_004307_070 Hb_004307_070 Hb_001143_140--Hb_004307_070 Hb_012743_020 Hb_012743_020 Hb_001143_140--Hb_012743_020 Hb_026144_030 Hb_026144_030 Hb_001143_140--Hb_026144_030 Hb_002000_130 Hb_002000_130 Hb_001143_140--Hb_002000_130 Hb_003226_030 Hb_003226_030 Hb_001143_140--Hb_003226_030 Hb_000614_190 Hb_000614_190 Hb_001143_140--Hb_000614_190 Hb_000095_070 Hb_000095_070 Hb_060198_010--Hb_000095_070 Hb_060198_010--Hb_143629_200 Hb_060198_010--Hb_001143_140 Hb_000465_450 Hb_000465_450 Hb_060198_010--Hb_000465_450 Hb_060198_010--Hb_001706_020 Hb_000069_540 Hb_000069_540 Hb_144703_010--Hb_000069_540 Hb_019496_040 Hb_019496_040 Hb_144703_010--Hb_019496_040 Hb_008598_010 Hb_008598_010 Hb_144703_010--Hb_008598_010 Hb_144703_010--Hb_000472_020 Hb_002902_040 Hb_002902_040 Hb_144703_010--Hb_002902_040 Hb_000342_020 Hb_000342_020 Hb_144703_010--Hb_000342_020 Hb_001174_030--Hb_001544_070 Hb_005034_010 Hb_005034_010 Hb_001174_030--Hb_005034_010 Hb_174101_010 Hb_174101_010 Hb_001174_030--Hb_174101_010 Hb_001174_030--Hb_000472_020 Hb_003562_040 Hb_003562_040 Hb_001174_030--Hb_003562_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.222193 7.04438 3.19518 8.46603 0.0475004 0.272952
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.75692 8.34647

CAGE analysis