Hb_002014_150

Information

Type -
Description -
Location Contig2014: 159379-161843
Sequence    

Annotation

kegg
ID rcu:RCOM_1052800
description monooxygenase, putative (EC:1.14.13.8)
nr
ID XP_002514307.1
description monooxygenase, putative [Ricinus communis]
swissprot
ID Q9SVQ1
description Indole-3-pyruvate monooxygenase YUCCA2 OS=Arabidopsis thaliana GN=YUC2 PE=1 SV=1
trembl
ID B9RKR3
description Flavin-containing monooxygenase OS=Ricinus communis GN=RCOM_1052800 PE=3 SV=1
Gene Ontology
ID GO:0004499
description indole-3-pyruvate monooxygenase yucca2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20470: 160886-161138 , PASA_asmbl_20471: 161614-162150
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002014_150 0.0 - - monooxygenase, putative [Ricinus communis]
2 Hb_163566_020 0.0156075107 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic isoform X2 [Jatropha curcas]
3 Hb_003032_080 0.0279443934 - - conserved hypothetical protein [Ricinus communis]
4 Hb_074312_010 0.0308431154 - - PREDICTED: cytochrome P450 82A3-like [Jatropha curcas]
5 Hb_005610_070 0.031796149 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
6 Hb_011382_010 0.0409701788 - - hypothetical protein CICLE_v10028106mg [Citrus clementina]
7 Hb_010288_070 0.0422006089 transcription factor TF Family: MYB MYB-like DNA-binding domain protein [Theobroma cacao]
8 Hb_000139_170 0.0458151573 - - PREDICTED: uncharacterized protein LOC105631957 [Jatropha curcas]
9 Hb_007187_010 0.0460752711 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
10 Hb_000010_160 0.046454776 - - Uncharacterized protein TCM_014508 [Theobroma cacao]
11 Hb_009707_020 0.0464683139 - - PREDICTED: 3-ketoacyl-CoA synthase 12 [Jatropha curcas]
12 Hb_000703_340 0.0465155125 - - Oxygen-evolving enhancer protein 2, chloroplast precursor, putative [Ricinus communis]
13 Hb_001775_020 0.0489234702 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
14 Hb_001862_040 0.0514142384 - - heat shock protein 70 (HSP70)-interacting protein, putative [Ricinus communis]
15 Hb_000844_080 0.0535962305 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]
16 Hb_002304_030 0.05529811 - - hypothetical protein JCGZ_21517 [Jatropha curcas]
17 Hb_005280_020 0.0572120661 - - glycine cleavage system h protein, putative [Ricinus communis]
18 Hb_001205_220 0.0605991327 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001295_070 0.0623012157 - - PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas]
20 Hb_005888_020 0.0632505875 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]

Gene co-expression network

sample Hb_002014_150 Hb_002014_150 Hb_163566_020 Hb_163566_020 Hb_002014_150--Hb_163566_020 Hb_003032_080 Hb_003032_080 Hb_002014_150--Hb_003032_080 Hb_074312_010 Hb_074312_010 Hb_002014_150--Hb_074312_010 Hb_005610_070 Hb_005610_070 Hb_002014_150--Hb_005610_070 Hb_011382_010 Hb_011382_010 Hb_002014_150--Hb_011382_010 Hb_010288_070 Hb_010288_070 Hb_002014_150--Hb_010288_070 Hb_163566_020--Hb_074312_010 Hb_163566_020--Hb_003032_080 Hb_163566_020--Hb_005610_070 Hb_163566_020--Hb_011382_010 Hb_007187_010 Hb_007187_010 Hb_163566_020--Hb_007187_010 Hb_003032_080--Hb_010288_070 Hb_001862_040 Hb_001862_040 Hb_003032_080--Hb_001862_040 Hb_003032_080--Hb_005610_070 Hb_003032_080--Hb_074312_010 Hb_074312_010--Hb_005610_070 Hb_074312_010--Hb_011382_010 Hb_074312_010--Hb_007187_010 Hb_074312_010--Hb_010288_070 Hb_005610_070--Hb_010288_070 Hb_005610_070--Hb_011382_010 Hb_002304_030 Hb_002304_030 Hb_005610_070--Hb_002304_030 Hb_000010_160 Hb_000010_160 Hb_011382_010--Hb_000010_160 Hb_011382_010--Hb_007187_010 Hb_009707_020 Hb_009707_020 Hb_011382_010--Hb_009707_020 Hb_001205_220 Hb_001205_220 Hb_011382_010--Hb_001205_220 Hb_010288_070--Hb_002304_030 Hb_005888_020 Hb_005888_020 Hb_010288_070--Hb_005888_020 Hb_003050_380 Hb_003050_380 Hb_010288_070--Hb_003050_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.6894 0.2762 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.03798

CAGE analysis