Hb_002014_160

Information

Type transcription factor
Description TF Family: HSF
Location Contig2014: 185412-190503
Sequence    

Annotation

kegg
ID pop:POPTR_0018s05770g
description POPTRDRAFT_261844; hypothetical protein
nr
ID XP_012076680.1
description PREDICTED: heat stress transcription factor C-1 [Jatropha curcas]
swissprot
ID Q9LV52
description Heat stress transcription factor C-1 OS=Arabidopsis thaliana GN=HSFC1 PE=2 SV=1
trembl
ID A0A067KBY4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07238 PE=3 SV=1
Gene Ontology
ID GO:0005634
description heat stress transcription factor c-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20473: 188870-190278
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002014_160 0.0 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor C-1 [Jatropha curcas]
2 Hb_000922_100 0.1259945857 - - PREDICTED: putative exosome complex component rrp40 [Jatropha curcas]
3 Hb_001545_060 0.1285181614 - - PREDICTED: uncharacterized protein LOC105643880 [Jatropha curcas]
4 Hb_152021_010 0.1311337457 - - PREDICTED: uncharacterized protein LOC105639312 isoform X2 [Jatropha curcas]
5 Hb_000896_120 0.1362803819 - - PREDICTED: acyl-protein thioesterase 2-like [Populus euphratica]
6 Hb_001278_050 0.1382772199 - - PREDICTED: uncharacterized protein LOC105636924 [Jatropha curcas]
7 Hb_000215_180 0.1387594444 - - hypothetical protein 17 [Hevea brasiliensis]
8 Hb_000722_040 0.1388302279 - - -
9 Hb_002659_040 0.1427648961 - - hydroxysteroid dehydrogenase, putative [Ricinus communis]
10 Hb_000398_160 0.1441661266 - - GDP-mannose transporter, putative [Ricinus communis]
11 Hb_001329_210 0.146877327 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
12 Hb_000260_580 0.1493175038 - - conserved hypothetical protein [Ricinus communis]
13 Hb_183086_040 0.1493737516 - - cytochrome b5 isoform Cb5-A [Vernicia fordii]
14 Hb_029243_040 0.150404201 - - PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial-like [Populus euphratica]
15 Hb_001935_030 0.1545028841 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000162_140 0.1561735938 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2 [Jatropha curcas]
17 Hb_001538_100 0.1582118504 - - PREDICTED: histone deacetylase 6 [Jatropha curcas]
18 Hb_001427_230 0.1585083135 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000424_210 0.1589363602 - - PREDICTED: uncharacterized protein LOC105638063 isoform X1 [Jatropha curcas]
20 Hb_010344_040 0.1590528957 - - PREDICTED: uncharacterized protein LOC105636452 [Jatropha curcas]

Gene co-expression network

sample Hb_002014_160 Hb_002014_160 Hb_000922_100 Hb_000922_100 Hb_002014_160--Hb_000922_100 Hb_001545_060 Hb_001545_060 Hb_002014_160--Hb_001545_060 Hb_152021_010 Hb_152021_010 Hb_002014_160--Hb_152021_010 Hb_000896_120 Hb_000896_120 Hb_002014_160--Hb_000896_120 Hb_001278_050 Hb_001278_050 Hb_002014_160--Hb_001278_050 Hb_000215_180 Hb_000215_180 Hb_002014_160--Hb_000215_180 Hb_183086_040 Hb_183086_040 Hb_000922_100--Hb_183086_040 Hb_000922_100--Hb_000215_180 Hb_000922_100--Hb_000896_120 Hb_000329_330 Hb_000329_330 Hb_000922_100--Hb_000329_330 Hb_000722_040 Hb_000722_040 Hb_000922_100--Hb_000722_040 Hb_000922_100--Hb_001545_060 Hb_003376_130 Hb_003376_130 Hb_001545_060--Hb_003376_130 Hb_000224_090 Hb_000224_090 Hb_001545_060--Hb_000224_090 Hb_000069_100 Hb_000069_100 Hb_001545_060--Hb_000069_100 Hb_017862_010 Hb_017862_010 Hb_001545_060--Hb_017862_010 Hb_000363_200 Hb_000363_200 Hb_001545_060--Hb_000363_200 Hb_000193_200 Hb_000193_200 Hb_001545_060--Hb_000193_200 Hb_152021_010--Hb_000215_180 Hb_152021_010--Hb_000896_120 Hb_152021_010--Hb_000922_100 Hb_152021_010--Hb_183086_040 Hb_001377_380 Hb_001377_380 Hb_152021_010--Hb_001377_380 Hb_000896_120--Hb_183086_040 Hb_000300_390 Hb_000300_390 Hb_000896_120--Hb_000300_390 Hb_000896_120--Hb_000215_180 Hb_001232_140 Hb_001232_140 Hb_000896_120--Hb_001232_140 Hb_005663_120 Hb_005663_120 Hb_000896_120--Hb_005663_120 Hb_001329_210 Hb_001329_210 Hb_001278_050--Hb_001329_210 Hb_002078_460 Hb_002078_460 Hb_001278_050--Hb_002078_460 Hb_002936_050 Hb_002936_050 Hb_001278_050--Hb_002936_050 Hb_000032_220 Hb_000032_220 Hb_001278_050--Hb_000032_220 Hb_007666_020 Hb_007666_020 Hb_001278_050--Hb_007666_020 Hb_002897_060 Hb_002897_060 Hb_001278_050--Hb_002897_060 Hb_000215_180--Hb_183086_040 Hb_000780_210 Hb_000780_210 Hb_000215_180--Hb_000780_210 Hb_000215_180--Hb_001377_380 Hb_000106_100 Hb_000106_100 Hb_000215_180--Hb_000106_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.84835 3.1499 0.152733 5.492 7.41021 5.68715
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
29.1095 24.0072 23.0452 7.74533 0.526796

CAGE analysis