Hb_002019_010

Information

Type -
Description -
Location Contig2019: 10497-14718
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002019_010 0.0 - - -
2 Hb_002333_030 0.2040165889 - - -
3 Hb_001313_010 0.2555960355 - - polyprotein [Ananas comosus]
4 Hb_000089_150 0.2627195374 - - PREDICTED: uncharacterized protein LOC105635964 [Jatropha curcas]
5 Hb_007467_020 0.304804836 - - -
6 Hb_000724_030 0.3195892995 - - PREDICTED: uncharacterized protein LOC105645165 [Jatropha curcas]
7 Hb_092855_030 0.3415507654 - - -
8 Hb_000189_230 0.3528806304 - - Auxin-induced protein [Aegilops tauschii]
9 Hb_003929_060 0.3538155961 - - PREDICTED: uncharacterized protein ECU03_1610 [Jatropha curcas]
10 Hb_047735_010 0.362622152 - - DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
11 Hb_007809_070 0.3669880841 - - conserved hypothetical protein [Ricinus communis]
12 Hb_155103_010 0.3680057987 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
13 Hb_003589_010 0.3685600698 - - -
14 Hb_008948_030 0.3689318963 - - hypothetical protein RCOM_0224470 [Ricinus communis]
15 Hb_003878_160 0.3696512201 - - conserved hypothetical protein [Ricinus communis]
16 Hb_022790_030 0.3702131266 - - PREDICTED: probable calcium-binding protein CML18 [Jatropha curcas]
17 Hb_181132_010 0.3725321457 - - -
18 Hb_000757_080 0.3732945311 - - vacuolar ATP synthase subunit G plant, putative [Ricinus communis]
19 Hb_100821_010 0.3760715447 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
20 Hb_010521_010 0.3764482151 - - hypothetical protein CICLE_v10026841mg [Citrus clementina]

Gene co-expression network

sample Hb_002019_010 Hb_002019_010 Hb_002333_030 Hb_002333_030 Hb_002019_010--Hb_002333_030 Hb_001313_010 Hb_001313_010 Hb_002019_010--Hb_001313_010 Hb_000089_150 Hb_000089_150 Hb_002019_010--Hb_000089_150 Hb_007467_020 Hb_007467_020 Hb_002019_010--Hb_007467_020 Hb_000724_030 Hb_000724_030 Hb_002019_010--Hb_000724_030 Hb_092855_030 Hb_092855_030 Hb_002019_010--Hb_092855_030 Hb_037605_010 Hb_037605_010 Hb_002333_030--Hb_037605_010 Hb_002333_030--Hb_000724_030 Hb_000589_430 Hb_000589_430 Hb_002333_030--Hb_000589_430 Hb_000483_170 Hb_000483_170 Hb_002333_030--Hb_000483_170 Hb_001792_010 Hb_001792_010 Hb_002333_030--Hb_001792_010 Hb_001313_010--Hb_007467_020 Hb_178389_010 Hb_178389_010 Hb_001313_010--Hb_178389_010 Hb_005671_030 Hb_005671_030 Hb_001313_010--Hb_005671_030 Hb_019654_120 Hb_019654_120 Hb_001313_010--Hb_019654_120 Hb_142068_020 Hb_142068_020 Hb_001313_010--Hb_142068_020 Hb_063433_010 Hb_063433_010 Hb_000089_150--Hb_063433_010 Hb_003929_060 Hb_003929_060 Hb_000089_150--Hb_003929_060 Hb_005389_110 Hb_005389_110 Hb_000089_150--Hb_005389_110 Hb_010521_010 Hb_010521_010 Hb_000089_150--Hb_010521_010 Hb_000089_150--Hb_001313_010 Hb_007467_020--Hb_178389_010 Hb_007467_020--Hb_019654_120 Hb_000656_130 Hb_000656_130 Hb_007467_020--Hb_000656_130 Hb_000454_020 Hb_000454_020 Hb_007467_020--Hb_000454_020 Hb_007467_020--Hb_142068_020 Hb_084858_010 Hb_084858_010 Hb_000724_030--Hb_084858_010 Hb_001014_130 Hb_001014_130 Hb_000724_030--Hb_001014_130 Hb_000544_100 Hb_000544_100 Hb_000724_030--Hb_000544_100 Hb_004648_010 Hb_004648_010 Hb_000724_030--Hb_004648_010 Hb_002299_050 Hb_002299_050 Hb_000724_030--Hb_002299_050 Hb_004724_120 Hb_004724_120 Hb_000724_030--Hb_004724_120 Hb_075722_010 Hb_075722_010 Hb_092855_030--Hb_075722_010 Hb_008727_130 Hb_008727_130 Hb_092855_030--Hb_008727_130 Hb_009557_010 Hb_009557_010 Hb_092855_030--Hb_009557_010 Hb_012650_010 Hb_012650_010 Hb_092855_030--Hb_012650_010 Hb_054343_010 Hb_054343_010 Hb_092855_030--Hb_054343_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.108612 0 0 0 0 0.075856
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.132734 0

CAGE analysis