Hb_002025_040

Information

Type -
Description -
Location Contig2025: 19822-20088
Sequence    

Annotation

kegg
ID rcu:RCOM_0774560
description nucleic acid binding protein, putative
nr
ID XP_012072438.1
description PREDICTED: WW domain-binding protein 4 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTG7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04866 PE=4 SV=1
Gene Ontology
ID GO:0015030
description ww domain-binding protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002025_040 0.0 - - PREDICTED: WW domain-binding protein 4 [Jatropha curcas]
2 Hb_009662_070 0.1493275751 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
3 Hb_029622_040 0.1879875333 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000500_250 0.2418669777 - - hypothetical protein CISIN_1g006096mg [Citrus sinensis]
5 Hb_005653_010 0.2419326239 - - CEN-like protein 2 [Jatropha curcas]
6 Hb_151052_010 0.2419391407 - - -
7 Hb_020178_030 0.2420087983 - - conserved hypothetical protein [Ricinus communis]
8 Hb_025311_010 0.2421846903 - - -
9 Hb_005375_080 0.2424137671 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Jatropha curcas]
10 Hb_000101_230 0.2432136618 - - hypothetical protein CICLE_v10030840mg [Citrus clementina]
11 Hb_000286_120 0.2433225784 - - PREDICTED: uncharacterized protein LOC105633393 [Jatropha curcas]
12 Hb_002311_420 0.2471399878 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
13 Hb_000137_120 0.24873589 - - hypothetical protein JCGZ_15021 [Jatropha curcas]
14 Hb_000024_100 0.2499199636 - - PREDICTED: uncharacterized protein LOC105631348 [Jatropha curcas]
15 Hb_005043_040 0.2499541354 - - hypothetical protein POPTR_0004s17180g [Populus trichocarpa]
16 Hb_025107_010 0.2519641956 - - PREDICTED: alkaline/neutral invertase CINV2-like [Sesamum indicum]
17 Hb_000428_040 0.2567955479 - - PREDICTED: protein trichome birefringence-like 31 [Populus euphratica]
18 Hb_143373_010 0.2573913713 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 [Gossypium raimondii]
19 Hb_006634_120 0.2579976573 - - PREDICTED: protein trichome birefringence-like 3 [Jatropha curcas]
20 Hb_010457_040 0.2583988489 - - PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]

Gene co-expression network

sample Hb_002025_040 Hb_002025_040 Hb_009662_070 Hb_009662_070 Hb_002025_040--Hb_009662_070 Hb_029622_040 Hb_029622_040 Hb_002025_040--Hb_029622_040 Hb_000500_250 Hb_000500_250 Hb_002025_040--Hb_000500_250 Hb_005653_010 Hb_005653_010 Hb_002025_040--Hb_005653_010 Hb_151052_010 Hb_151052_010 Hb_002025_040--Hb_151052_010 Hb_020178_030 Hb_020178_030 Hb_002025_040--Hb_020178_030 Hb_009662_070--Hb_029622_040 Hb_000005_140 Hb_000005_140 Hb_009662_070--Hb_000005_140 Hb_069338_010 Hb_069338_010 Hb_009662_070--Hb_069338_010 Hb_002045_030 Hb_002045_030 Hb_009662_070--Hb_002045_030 Hb_135737_010 Hb_135737_010 Hb_009662_070--Hb_135737_010 Hb_000007_190 Hb_000007_190 Hb_029622_040--Hb_000007_190 Hb_000392_500 Hb_000392_500 Hb_029622_040--Hb_000392_500 Hb_103225_040 Hb_103225_040 Hb_029622_040--Hb_103225_040 Hb_152868_020 Hb_152868_020 Hb_029622_040--Hb_152868_020 Hb_003793_010 Hb_003793_010 Hb_029622_040--Hb_003793_010 Hb_000500_250--Hb_020178_030 Hb_025311_010 Hb_025311_010 Hb_000500_250--Hb_025311_010 Hb_005375_080 Hb_005375_080 Hb_000500_250--Hb_005375_080 Hb_000101_230 Hb_000101_230 Hb_000500_250--Hb_000101_230 Hb_000286_120 Hb_000286_120 Hb_000500_250--Hb_000286_120 Hb_000500_250--Hb_005653_010 Hb_005653_010--Hb_151052_010 Hb_005653_010--Hb_020178_030 Hb_005653_010--Hb_025311_010 Hb_005653_010--Hb_005375_080 Hb_000024_100 Hb_000024_100 Hb_005653_010--Hb_000024_100 Hb_151052_010--Hb_000500_250 Hb_151052_010--Hb_020178_030 Hb_151052_010--Hb_025311_010 Hb_151052_010--Hb_005375_080 Hb_151052_010--Hb_000024_100 Hb_020178_030--Hb_025311_010 Hb_020178_030--Hb_005375_080 Hb_020178_030--Hb_000101_230 Hb_020178_030--Hb_000286_120 Hb_002311_420 Hb_002311_420 Hb_020178_030--Hb_002311_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 2.06588 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.405578 0 0 1.16138

CAGE analysis