Hb_002025_240

Information

Type -
Description -
Location Contig2025: 183627-184356
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002025_240 0.0 - - -
2 Hb_130579_050 0.0459635519 - - hypothetical protein JCGZ_25577 [Jatropha curcas]
3 Hb_003442_120 0.0755227106 - - hypothetical protein VITISV_019818 [Vitis vinifera]
4 Hb_118046_010 0.0906856549 - - PREDICTED: uncharacterized protein LOC102596706 [Solanum tuberosum]
5 Hb_004063_010 0.1340596358 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_003727_060 0.1402119412 - - nucleic acid binding protein, putative [Ricinus communis]
7 Hb_027337_050 0.1627962681 - - polyprotein [Citrus endogenous pararetrovirus]
8 Hb_012807_070 0.1671864346 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
9 Hb_000028_270 0.1706430001 - - -
10 Hb_002571_050 0.1853257779 - - PREDICTED: cation/calcium exchanger 1 [Jatropha curcas]
11 Hb_000243_310 0.1878887356 - - lactoylglutathione lyase, putative [Ricinus communis]
12 Hb_009780_010 0.1903843429 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000236_430 0.1968826079 - - PREDICTED: uncharacterized protein LOC105633302 [Jatropha curcas]
14 Hb_017098_020 0.199239218 - - Zinc finger protein GIS2 [Medicago truncatula]
15 Hb_004021_120 0.2000107957 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
16 Hb_002871_170 0.2004949349 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
17 Hb_001899_040 0.2051975405 - - PREDICTED: cyclic nucleotide-gated ion channel 2-like [Jatropha curcas]
18 Hb_001205_170 0.2067266518 - - PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
19 Hb_002585_060 0.2081412644 - - PREDICTED: uncharacterized protein LOC104899128, partial [Beta vulgaris subsp. vulgaris]
20 Hb_042141_010 0.2113191255 - - -

Gene co-expression network

sample Hb_002025_240 Hb_002025_240 Hb_130579_050 Hb_130579_050 Hb_002025_240--Hb_130579_050 Hb_003442_120 Hb_003442_120 Hb_002025_240--Hb_003442_120 Hb_118046_010 Hb_118046_010 Hb_002025_240--Hb_118046_010 Hb_004063_010 Hb_004063_010 Hb_002025_240--Hb_004063_010 Hb_003727_060 Hb_003727_060 Hb_002025_240--Hb_003727_060 Hb_027337_050 Hb_027337_050 Hb_002025_240--Hb_027337_050 Hb_130579_050--Hb_003442_120 Hb_130579_050--Hb_118046_010 Hb_130579_050--Hb_004063_010 Hb_130579_050--Hb_003727_060 Hb_000028_270 Hb_000028_270 Hb_130579_050--Hb_000028_270 Hb_003442_120--Hb_118046_010 Hb_003442_120--Hb_004063_010 Hb_003442_120--Hb_003727_060 Hb_003442_120--Hb_000028_270 Hb_118046_010--Hb_004063_010 Hb_118046_010--Hb_003727_060 Hb_118046_010--Hb_000028_270 Hb_004063_010--Hb_003727_060 Hb_002585_060 Hb_002585_060 Hb_004063_010--Hb_002585_060 Hb_058095_030 Hb_058095_030 Hb_004063_010--Hb_058095_030 Hb_004063_010--Hb_000028_270 Hb_003727_060--Hb_002585_060 Hb_003938_100 Hb_003938_100 Hb_003727_060--Hb_003938_100 Hb_038190_030 Hb_038190_030 Hb_003727_060--Hb_038190_030 Hb_001899_040 Hb_001899_040 Hb_027337_050--Hb_001899_040 Hb_027337_050--Hb_130579_050 Hb_172426_010 Hb_172426_010 Hb_027337_050--Hb_172426_010 Hb_001205_170 Hb_001205_170 Hb_027337_050--Hb_001205_170 Hb_027337_050--Hb_003727_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.388463 0.0690303 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0650052 0.268729

CAGE analysis