Hb_002026_040

Information

Type -
Description -
Location Contig2026: 31637-33244
Sequence    

Annotation

kegg
ID rcu:RCOM_1687080
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012086874.1
description PREDICTED: cytochrome P450 86A7 [Jatropha curcas]
swissprot
ID O80823
description Cytochrome P450 86A8 OS=Arabidopsis thaliana GN=CYP86A8 PE=2 SV=1
trembl
ID A0A067JNG0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20573 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 86a7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 003_K02.ab1: 32648-33410 , 017_M01.ab1: 32744-33410 , 019_K17.ab1: 32707-33411 , 020_A05.ab1: 32604-33410 , 031_L02.ab1: 32647-33411 , 039_E14.ab1: 32605-33410

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002026_040 0.0 - - PREDICTED: cytochrome P450 86A7 [Jatropha curcas]
2 Hb_013849_010 0.0229643325 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
3 Hb_000155_280 0.0302992498 - - PREDICTED: GDSL esterase/lipase At5g45950 [Jatropha curcas]
4 Hb_002585_050 0.0416941405 - - conserved hypothetical protein [Ricinus communis]
5 Hb_007816_010 0.0422718009 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
6 Hb_000592_150 0.042812751 - - Os05g0413200 [Oryza sativa Japonica Group]
7 Hb_004228_050 0.0430348792 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
8 Hb_002837_010 0.0433587696 - - hypothetical protein POPTR_0497s00200g [Populus trichocarpa]
9 Hb_002305_040 0.0447540884 - - TMV resistance protein N, putative [Ricinus communis]
10 Hb_075653_010 0.0451172921 - - PREDICTED: tyrosine decarboxylase 1-like [Jatropha curcas]
11 Hb_011846_020 0.045221645 - - hypothetical protein POPTR_0019s13390g [Populus trichocarpa]
12 Hb_002186_150 0.0459511035 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
13 Hb_046150_010 0.0459651949 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 6-like isoform X1 [Citrus sinensis]
14 Hb_000265_040 0.0467963402 - - PREDICTED: subtilisin-like protease, partial [Prunus mume]
15 Hb_001536_070 0.0468487565 - - hypothetical protein JCGZ_20053 [Jatropha curcas]
16 Hb_107495_020 0.0471919308 - - PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
17 Hb_004744_030 0.0472445034 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
18 Hb_000500_380 0.0475629477 - - PREDICTED: GDSL esterase/lipase At5g45670-like [Jatropha curcas]
19 Hb_006485_020 0.0479269133 - - hypothetical protein JCGZ_15092 [Jatropha curcas]
20 Hb_006953_010 0.0485675992 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_002026_040 Hb_002026_040 Hb_013849_010 Hb_013849_010 Hb_002026_040--Hb_013849_010 Hb_000155_280 Hb_000155_280 Hb_002026_040--Hb_000155_280 Hb_002585_050 Hb_002585_050 Hb_002026_040--Hb_002585_050 Hb_007816_010 Hb_007816_010 Hb_002026_040--Hb_007816_010 Hb_000592_150 Hb_000592_150 Hb_002026_040--Hb_000592_150 Hb_004228_050 Hb_004228_050 Hb_002026_040--Hb_004228_050 Hb_011846_020 Hb_011846_020 Hb_013849_010--Hb_011846_020 Hb_002837_010 Hb_002837_010 Hb_013849_010--Hb_002837_010 Hb_002186_150 Hb_002186_150 Hb_013849_010--Hb_002186_150 Hb_046150_010 Hb_046150_010 Hb_013849_010--Hb_046150_010 Hb_004744_030 Hb_004744_030 Hb_013849_010--Hb_004744_030 Hb_006485_020 Hb_006485_020 Hb_000155_280--Hb_006485_020 Hb_017959_020 Hb_017959_020 Hb_000155_280--Hb_017959_020 Hb_000155_280--Hb_013849_010 Hb_002376_020 Hb_002376_020 Hb_000155_280--Hb_002376_020 Hb_005170_050 Hb_005170_050 Hb_000155_280--Hb_005170_050 Hb_002585_050--Hb_007816_010 Hb_002585_050--Hb_000592_150 Hb_002585_050--Hb_004228_050 Hb_002585_050--Hb_002837_010 Hb_002305_040 Hb_002305_040 Hb_002585_050--Hb_002305_040 Hb_075653_010 Hb_075653_010 Hb_002585_050--Hb_075653_010 Hb_007816_010--Hb_002837_010 Hb_007816_010--Hb_011846_020 Hb_007816_010--Hb_002186_150 Hb_007816_010--Hb_046150_010 Hb_007816_010--Hb_004744_030 Hb_000592_150--Hb_004228_050 Hb_000592_150--Hb_002305_040 Hb_000592_150--Hb_075653_010 Hb_000265_040 Hb_000265_040 Hb_000592_150--Hb_000265_040 Hb_001536_070 Hb_001536_070 Hb_000592_150--Hb_001536_070 Hb_004228_050--Hb_002305_040 Hb_004228_050--Hb_075653_010 Hb_004228_050--Hb_000265_040 Hb_004228_050--Hb_001536_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0964221 356.005 44.2096 0 0.0125477
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.28517

CAGE analysis