Hb_002026_050

Information

Type -
Description -
Location Contig2026: 46790-47611
Sequence    

Annotation

kegg
ID rcu:RCOM_1687090
description potassium channel tetramerization domain-containing protein, putative
nr
ID XP_012086873.1
description PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
swissprot
ID Q9FN67
description BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana GN=At5g41330 PE=2 SV=1
trembl
ID A0A067JN47
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20572 PE=4 SV=1
Gene Ontology
ID GO:0051260
description btb poz domain-containing protein at5g41330

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20619: 46357-47806
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002026_050 0.0 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
2 Hb_004109_210 0.1319879311 - - PREDICTED: 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like [Jatropha curcas]
3 Hb_000365_280 0.1362870781 - - calcium binding protein/cast, putative [Ricinus communis]
4 Hb_002893_030 0.1375798101 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Populus euphratica]
5 Hb_001059_110 0.1442331844 - - PREDICTED: uncharacterized protein LOC105649457 [Jatropha curcas]
6 Hb_005408_080 0.1494551286 - - PREDICTED: U-box domain-containing protein 16 [Jatropha curcas]
7 Hb_007163_050 0.1522401225 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9 [Jatropha curcas]
8 Hb_004241_200 0.159711598 - - hypothetical protein JCGZ_00744 [Jatropha curcas]
9 Hb_008406_030 0.1635108953 transcription factor TF Family: ERF AP2/ERF super family protein [Hevea brasiliensis]
10 Hb_005054_020 0.1638956838 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Jatropha curcas]
11 Hb_000020_100 0.1639316348 - - PREDICTED: uncharacterized protein LOC105636310 [Jatropha curcas]
12 Hb_188281_010 0.1642661589 - - carboxylic ester hydrolase, putative [Ricinus communis]
13 Hb_002400_040 0.1683165258 - - PREDICTED: uncharacterized protein LOC105637633 [Jatropha curcas]
14 Hb_062226_150 0.1712599467 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
15 Hb_001514_250 0.1720533076 - - GAST1 protein precursor, putative [Ricinus communis]
16 Hb_000742_290 0.1736417582 - - Reticuline oxidase precursor, putative [Ricinus communis]
17 Hb_004007_070 0.1790276084 - - adenylsulfate kinase, putative [Ricinus communis]
18 Hb_000161_180 0.1792834563 - - Protein argonaute 2 [Morus notabilis]
19 Hb_001472_140 0.1813322794 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
20 Hb_000077_160 0.181490313 - - Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative [Theobroma cacao]

Gene co-expression network

sample Hb_002026_050 Hb_002026_050 Hb_004109_210 Hb_004109_210 Hb_002026_050--Hb_004109_210 Hb_000365_280 Hb_000365_280 Hb_002026_050--Hb_000365_280 Hb_002893_030 Hb_002893_030 Hb_002026_050--Hb_002893_030 Hb_001059_110 Hb_001059_110 Hb_002026_050--Hb_001059_110 Hb_005408_080 Hb_005408_080 Hb_002026_050--Hb_005408_080 Hb_007163_050 Hb_007163_050 Hb_002026_050--Hb_007163_050 Hb_004109_210--Hb_002893_030 Hb_000164_010 Hb_000164_010 Hb_004109_210--Hb_000164_010 Hb_005054_020 Hb_005054_020 Hb_004109_210--Hb_005054_020 Hb_004116_070 Hb_004116_070 Hb_004109_210--Hb_004116_070 Hb_000020_100 Hb_000020_100 Hb_004109_210--Hb_000020_100 Hb_000479_060 Hb_000479_060 Hb_000365_280--Hb_000479_060 Hb_004007_070 Hb_004007_070 Hb_000365_280--Hb_004007_070 Hb_000365_280--Hb_002893_030 Hb_000365_280--Hb_005054_020 Hb_000109_190 Hb_000109_190 Hb_000365_280--Hb_000109_190 Hb_002893_030--Hb_004007_070 Hb_188281_010 Hb_188281_010 Hb_002893_030--Hb_188281_010 Hb_103942_030 Hb_103942_030 Hb_002893_030--Hb_103942_030 Hb_012395_110 Hb_012395_110 Hb_002893_030--Hb_012395_110 Hb_000742_290 Hb_000742_290 Hb_001059_110--Hb_000742_290 Hb_048476_130 Hb_048476_130 Hb_001059_110--Hb_048476_130 Hb_004531_130 Hb_004531_130 Hb_001059_110--Hb_004531_130 Hb_000085_410 Hb_000085_410 Hb_001059_110--Hb_000085_410 Hb_003992_020 Hb_003992_020 Hb_001059_110--Hb_003992_020 Hb_002400_040 Hb_002400_040 Hb_005408_080--Hb_002400_040 Hb_000892_030 Hb_000892_030 Hb_005408_080--Hb_000892_030 Hb_094437_050 Hb_094437_050 Hb_005408_080--Hb_094437_050 Hb_000110_260 Hb_000110_260 Hb_005408_080--Hb_000110_260 Hb_005725_280 Hb_005725_280 Hb_005408_080--Hb_005725_280 Hb_001329_080 Hb_001329_080 Hb_005408_080--Hb_001329_080 Hb_007163_050--Hb_188281_010 Hb_007749_020 Hb_007749_020 Hb_007163_050--Hb_007749_020 Hb_000163_040 Hb_000163_040 Hb_007163_050--Hb_000163_040 Hb_000563_140 Hb_000563_140 Hb_007163_050--Hb_000563_140 Hb_001514_250 Hb_001514_250 Hb_007163_050--Hb_001514_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.25661 76.6176 87.7323 186.653 1.89655 1.67183
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.62285 18.2265 11.6976 7.86752 25.3496

CAGE analysis