Hb_002027_210

Information

Type -
Description -
Location Contig2027: 114591-118114
Sequence    

Annotation

kegg
ID rcu:RCOM_0647010
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_002524774.1
description Histidine-containing phosphotransfer protein, putative [Ricinus communis]
swissprot
ID Q8L9T7
description Histidine-containing phosphotransfer protein 5 OS=Arabidopsis thaliana GN=AHP5 PE=1 SV=2
trembl
ID B9SFK5
description Histidine-containing phosphotransfer protein, putative OS=Ricinus communis GN=RCOM_0647010 PE=4 SV=1
Gene Ontology
ID GO:0004871
description histidine-containing phosphotransfer protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20699: 114512-118017 , PASA_asmbl_20700: 115609-115793
cDNA
(Sanger)
(ID:Location)		 019_A02.ab1: 114512-117919

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002027_210 0.0 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
2 Hb_000173_220 0.0455285027 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At5g19025 [Jatropha curcas]
3 Hb_003376_030 0.0598662216 - - PREDICTED: ribonuclease P protein subunit p29 isoform X2 [Jatropha curcas]
4 Hb_005432_030 0.0605919275 - - PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Gossypium raimondii]
5 Hb_000146_020 0.0631575447 - - PREDICTED: protein TIC 21, chloroplastic [Jatropha curcas]
6 Hb_001191_090 0.0654184718 - - PREDICTED: uncharacterized protein LOC105643880 [Jatropha curcas]
7 Hb_003455_040 0.0655800747 - - hypothetical protein JCGZ_17270 [Jatropha curcas]
8 Hb_002918_200 0.067026961 - - -
9 Hb_000025_120 0.0706152578 - - PREDICTED: uncharacterized protein LOC105628946 isoform X1 [Jatropha curcas]
10 Hb_000625_070 0.0709579916 transcription factor TF Family: CSD PREDICTED: cold shock domain-containing protein 3 [Jatropha curcas]
11 Hb_000170_010 0.0719624992 - - o-methyltransferase, putative [Ricinus communis]
12 Hb_000120_750 0.0745790519 desease resistance Gene Name: NTPase_1 ATP binding protein, putative [Ricinus communis]
13 Hb_000347_410 0.0768401895 - - PREDICTED: transcription initiation factor TFIID subunit 9 [Jatropha curcas]
14 Hb_017948_010 0.0771726349 - - mitochondrial thioredoxin 2 [Hevea brasiliensis]
15 Hb_003632_010 0.0779014449 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002097_060 0.0791265912 - - PREDICTED: 50S ribosomal protein L9, chloroplastic-like isoform X1 [Jatropha curcas]
17 Hb_000834_270 0.0796208184 - - PREDICTED: uncharacterized protein LOC105647032 isoform X2 [Jatropha curcas]
18 Hb_012675_060 0.0805506063 - - hypothetical protein PRUPE_ppa007715mg [Prunus persica]
19 Hb_148200_010 0.0805728056 - - hypothetical protein 33 [Hevea brasiliensis]
20 Hb_004837_140 0.081921844 - - hypothetical protein PRUPE_ppa012469mg [Prunus persica]

Gene co-expression network

sample Hb_002027_210 Hb_002027_210 Hb_000173_220 Hb_000173_220 Hb_002027_210--Hb_000173_220 Hb_003376_030 Hb_003376_030 Hb_002027_210--Hb_003376_030 Hb_005432_030 Hb_005432_030 Hb_002027_210--Hb_005432_030 Hb_000146_020 Hb_000146_020 Hb_002027_210--Hb_000146_020 Hb_001191_090 Hb_001191_090 Hb_002027_210--Hb_001191_090 Hb_003455_040 Hb_003455_040 Hb_002027_210--Hb_003455_040 Hb_000173_220--Hb_001191_090 Hb_017948_010 Hb_017948_010 Hb_000173_220--Hb_017948_010 Hb_000173_220--Hb_003455_040 Hb_000574_480 Hb_000574_480 Hb_000173_220--Hb_000574_480 Hb_012675_060 Hb_012675_060 Hb_000173_220--Hb_012675_060 Hb_003376_030--Hb_003455_040 Hb_002097_060 Hb_002097_060 Hb_003376_030--Hb_002097_060 Hb_148200_010 Hb_148200_010 Hb_003376_030--Hb_148200_010 Hb_003376_030--Hb_000146_020 Hb_001160_030 Hb_001160_030 Hb_003376_030--Hb_001160_030 Hb_000170_010 Hb_000170_010 Hb_005432_030--Hb_000170_010 Hb_000625_070 Hb_000625_070 Hb_005432_030--Hb_000625_070 Hb_000496_060 Hb_000496_060 Hb_005432_030--Hb_000496_060 Hb_004108_230 Hb_004108_230 Hb_005432_030--Hb_004108_230 Hb_003175_040 Hb_003175_040 Hb_005432_030--Hb_003175_040 Hb_000347_410 Hb_000347_410 Hb_000146_020--Hb_000347_410 Hb_000834_270 Hb_000834_270 Hb_000146_020--Hb_000834_270 Hb_007943_090 Hb_007943_090 Hb_000146_020--Hb_007943_090 Hb_008289_060 Hb_008289_060 Hb_000146_020--Hb_008289_060 Hb_003053_030 Hb_003053_030 Hb_001191_090--Hb_003053_030 Hb_001191_090--Hb_148200_010 Hb_006573_220 Hb_006573_220 Hb_001191_090--Hb_006573_220 Hb_000181_300 Hb_000181_300 Hb_001191_090--Hb_000181_300 Hb_001191_090--Hb_003376_030 Hb_003994_040 Hb_003994_040 Hb_003455_040--Hb_003994_040 Hb_012753_160 Hb_012753_160 Hb_003455_040--Hb_012753_160 Hb_003455_040--Hb_002097_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.7802 7.34797 5.76996 11.5202 15.2647 17.7817
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
43.3009 46.8492 33.4168 9.94196 11.6935

CAGE analysis