Hb_002031_020

Information

Type -
Description -
Location Contig2031: 28352-28660
Sequence    

Annotation

kegg
ID pop:POPTR_0125s00200g
description hypothetical protein
nr
ID KDP27272.1
description hypothetical protein JCGZ_19971 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JTS4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19971 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002031_020 0.0 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
2 Hb_000581_010 0.0446549208 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
3 Hb_000487_350 0.0517866031 - - conserved hypothetical protein [Ricinus communis]
4 Hb_180518_010 0.0568103521 - - PREDICTED: receptor-like protein 2 [Jatropha curcas]
5 Hb_027577_010 0.0671470298 - - PREDICTED: uncharacterized protein LOC104779928 [Camelina sativa]
6 Hb_188281_020 0.0720111931 - - PREDICTED: uncharacterized protein LOC105629522 [Jatropha curcas]
7 Hb_000188_040 0.0795517081 - - PREDICTED: uncharacterized protein LOC105629522 [Jatropha curcas]
8 Hb_000729_040 0.0871678136 - - xyloglucan endotransglucosylase/hydrolase protein 10 precursor [Populus trichocarpa]
9 Hb_003788_030 0.0896714132 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
10 Hb_002785_020 0.0919105448 - - PREDICTED: laccase-4-like [Jatropha curcas]
11 Hb_000462_120 0.0969354874 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105642310 [Jatropha curcas]
12 Hb_000422_090 0.1011853156 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001856_250 0.1021107858 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
14 Hb_005291_020 0.1025705625 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000483_340 0.1059214031 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000327_350 0.1071489153 - - PREDICTED: 3-ketoacyl-CoA synthase 21-like [Jatropha curcas]
17 Hb_000193_130 0.1074645633 - - nucleic acid binding protein, putative [Ricinus communis]
18 Hb_002734_020 0.1079384364 - - PREDICTED: uncharacterized protein LOC105631540 [Jatropha curcas]
19 Hb_000594_010 0.1091582596 - - PREDICTED: lysine histidine transporter-like 6 isoform X3 [Populus euphratica]
20 Hb_000684_190 0.1101033671 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_002031_020 Hb_002031_020 Hb_000581_010 Hb_000581_010 Hb_002031_020--Hb_000581_010 Hb_000487_350 Hb_000487_350 Hb_002031_020--Hb_000487_350 Hb_180518_010 Hb_180518_010 Hb_002031_020--Hb_180518_010 Hb_027577_010 Hb_027577_010 Hb_002031_020--Hb_027577_010 Hb_188281_020 Hb_188281_020 Hb_002031_020--Hb_188281_020 Hb_000188_040 Hb_000188_040 Hb_002031_020--Hb_000188_040 Hb_000581_010--Hb_000487_350 Hb_000581_010--Hb_027577_010 Hb_000581_010--Hb_180518_010 Hb_000729_040 Hb_000729_040 Hb_000581_010--Hb_000729_040 Hb_001856_250 Hb_001856_250 Hb_000581_010--Hb_001856_250 Hb_000487_350--Hb_027577_010 Hb_000487_350--Hb_180518_010 Hb_000487_350--Hb_001856_250 Hb_000487_350--Hb_000729_040 Hb_180518_010--Hb_027577_010 Hb_005291_020 Hb_005291_020 Hb_180518_010--Hb_005291_020 Hb_103468_010 Hb_103468_010 Hb_180518_010--Hb_103468_010 Hb_027577_010--Hb_001856_250 Hb_027577_010--Hb_000729_040 Hb_000483_340 Hb_000483_340 Hb_027577_010--Hb_000483_340 Hb_003788_030 Hb_003788_030 Hb_188281_020--Hb_003788_030 Hb_188281_020--Hb_000581_010 Hb_025557_080 Hb_025557_080 Hb_188281_020--Hb_025557_080 Hb_025557_070 Hb_025557_070 Hb_188281_020--Hb_025557_070 Hb_188281_020--Hb_000487_350 Hb_000188_040--Hb_180518_010 Hb_001454_350 Hb_001454_350 Hb_000188_040--Hb_001454_350 Hb_000188_040--Hb_005291_020 Hb_000462_120 Hb_000462_120 Hb_000188_040--Hb_000462_120 Hb_006252_070 Hb_006252_070 Hb_000188_040--Hb_006252_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 15.0336 28.9328 1393.19 0 0.871012
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.34782 0 0 35.2758 341.341

CAGE analysis