Hb_002043_010

Information

Type -
Description -
Location Contig2043: 11771-50653
Sequence    

Annotation

kegg
ID rcu:RCOM_1486330
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.30)
nr
ID XP_002515904.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID C0LGG4
description Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2
trembl
ID B9RQ85
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_1486330 PE=3 SV=1
Gene Ontology
ID GO:0004672
description brassinosteroid insensitive 1-associated receptor kinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002043_010 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_002110_260 0.144630595 - - zinc finger protein, putative [Ricinus communis]
3 Hb_012565_080 0.1813631727 - - serine/threonine kinase, putative [Ricinus communis]
4 Hb_000384_050 0.1948879532 - - hypothetical protein POPTR_0077s002402g, partial [Populus trichocarpa]
5 Hb_002524_030 0.1954470547 - - -
6 Hb_002827_020 0.1958685173 - - PREDICTED: plant intracellular Ras-group-related LRR protein 5-like [Jatropha curcas]
7 Hb_000036_050 0.1968738763 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6-like [Camelina sativa]
8 Hb_000928_040 0.1988522093 - - cytochrome P450, putative [Ricinus communis]
9 Hb_007520_020 0.1992934737 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Hevea brasiliensis]
10 Hb_003517_020 0.2016184271 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 3-like [Jatropha curcas]
11 Hb_000645_240 0.201745259 - - AMP dependent ligase, putative [Ricinus communis]
12 Hb_001946_150 0.2032289919 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004410_150 0.2058242201 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 1 [Jatropha curcas]
14 Hb_000789_240 0.2063289501 - - gamma glutamyl transpeptidases, putative [Ricinus communis]
15 Hb_000081_120 0.2116070465 - - H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]
16 Hb_000002_270 0.2132771414 - - hypothetical protein VITISV_043897 [Vitis vinifera]
17 Hb_000645_210 0.2133014122 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X2 [Jatropha curcas]
18 Hb_000840_040 0.2137917599 - - monoxygenase, putative [Ricinus communis]
19 Hb_000940_150 0.2138725337 - - PREDICTED: uncharacterized protein LOC105643779 [Jatropha curcas]
20 Hb_000661_260 0.2163442995 - - PREDICTED: uncharacterized protein LOC105648304 [Jatropha curcas]

Gene co-expression network

sample Hb_002043_010 Hb_002043_010 Hb_002110_260 Hb_002110_260 Hb_002043_010--Hb_002110_260 Hb_012565_080 Hb_012565_080 Hb_002043_010--Hb_012565_080 Hb_000384_050 Hb_000384_050 Hb_002043_010--Hb_000384_050 Hb_002524_030 Hb_002524_030 Hb_002043_010--Hb_002524_030 Hb_002827_020 Hb_002827_020 Hb_002043_010--Hb_002827_020 Hb_000036_050 Hb_000036_050 Hb_002043_010--Hb_000036_050 Hb_002110_260--Hb_000384_050 Hb_001946_150 Hb_001946_150 Hb_002110_260--Hb_001946_150 Hb_002110_260--Hb_012565_080 Hb_000645_210 Hb_000645_210 Hb_002110_260--Hb_000645_210 Hb_000928_040 Hb_000928_040 Hb_002110_260--Hb_000928_040 Hb_000789_240 Hb_000789_240 Hb_012565_080--Hb_000789_240 Hb_020178_060 Hb_020178_060 Hb_012565_080--Hb_020178_060 Hb_001416_020 Hb_001416_020 Hb_012565_080--Hb_001416_020 Hb_012565_080--Hb_002827_020 Hb_000283_150 Hb_000283_150 Hb_012565_080--Hb_000283_150 Hb_002016_040 Hb_002016_040 Hb_012565_080--Hb_002016_040 Hb_000343_100 Hb_000343_100 Hb_000384_050--Hb_000343_100 Hb_003517_020 Hb_003517_020 Hb_000384_050--Hb_003517_020 Hb_000384_050--Hb_012565_080 Hb_102011_010 Hb_102011_010 Hb_000384_050--Hb_102011_010 Hb_000661_260 Hb_000661_260 Hb_002524_030--Hb_000661_260 Hb_000735_070 Hb_000735_070 Hb_002524_030--Hb_000735_070 Hb_007472_080 Hb_007472_080 Hb_002524_030--Hb_007472_080 Hb_002153_030 Hb_002153_030 Hb_002524_030--Hb_002153_030 Hb_002524_030--Hb_003517_020 Hb_001322_180 Hb_001322_180 Hb_002524_030--Hb_001322_180 Hb_000200_280 Hb_000200_280 Hb_002827_020--Hb_000200_280 Hb_011716_090 Hb_011716_090 Hb_002827_020--Hb_011716_090 Hb_000640_130 Hb_000640_130 Hb_002827_020--Hb_000640_130 Hb_006586_030 Hb_006586_030 Hb_002827_020--Hb_006586_030 Hb_002827_020--Hb_001416_020 Hb_002827_020--Hb_000283_150 Hb_007520_020 Hb_007520_020 Hb_000036_050--Hb_007520_020 Hb_000036_050--Hb_000283_150 Hb_001514_130 Hb_001514_130 Hb_000036_050--Hb_001514_130 Hb_004136_040 Hb_004136_040 Hb_000036_050--Hb_004136_040 Hb_000036_050--Hb_002827_020 Hb_000036_050--Hb_000640_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0710715 0.292026 0.00529085 0.0313985 0.0526432 0.0538475
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0411211 0.0566366 0.0547277 0.39172 0.104742

CAGE analysis