Hb_002045_080

Information

Type -
Description -
Location Contig2045: 59035-61390
Sequence    

Annotation

kegg
ID rcu:RCOM_0767340
description hypothetical protein
nr
ID XP_012092125.1
description PREDICTED: uncharacterized protein LOC105649907 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JMX9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21846 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002045_080 0.0 - - PREDICTED: uncharacterized protein LOC105649907 [Jatropha curcas]
2 Hb_059554_010 0.1980714306 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
3 Hb_001728_120 0.2074621503 - - hypothetical protein POPTR_0001s15540g, partial [Populus trichocarpa]
4 Hb_001488_190 0.2135200405 - - alpha-amylase, putative [Ricinus communis]
5 Hb_002173_050 0.2165205615 - - UDP-glucosyltransferase, putative [Ricinus communis]
6 Hb_012090_030 0.2232614856 - - PREDICTED: autophagy-related protein 8C isoform X2 [Phoenix dactylifera]
7 Hb_003164_010 0.2311145026 - - ankyrin repeat-containing protein, putative [Ricinus communis]
8 Hb_005695_100 0.2342232344 - - PREDICTED: uncharacterized protein LOC105638839 [Jatropha curcas]
9 Hb_000544_190 0.2372500113 - - ARF GTPase activator, putative [Ricinus communis]
10 Hb_011861_090 0.2456597187 - - PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Jatropha curcas]
11 Hb_001105_120 0.2479387464 - - glucose-1-phosphate adenylyltransferase, putative [Ricinus communis]
12 Hb_166635_010 0.251179034 - - ptm1, putative [Ricinus communis]
13 Hb_042083_030 0.2537712909 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_003197_010 0.2568382128 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001310_090 0.2577341266 - - PREDICTED: BTB/POZ domain-containing protein NPY5 [Jatropha curcas]
16 Hb_007534_060 0.2587533242 - - protein binding protein, putative [Ricinus communis]
17 Hb_002815_020 0.2646963352 transcription factor TF Family: G2-like Homeodomain-like superfamily protein isoform 2 [Theobroma cacao]
18 Hb_000389_040 0.2656745024 - - PREDICTED: BTB/POZ domain-containing protein At5g03250-like [Jatropha curcas]
19 Hb_000529_010 0.2667206676 - - cyclin d, putative [Ricinus communis]
20 Hb_133279_010 0.2668257171 - - spermidine synthase 1, putative [Ricinus communis]

Gene co-expression network

sample Hb_002045_080 Hb_002045_080 Hb_059554_010 Hb_059554_010 Hb_002045_080--Hb_059554_010 Hb_001728_120 Hb_001728_120 Hb_002045_080--Hb_001728_120 Hb_001488_190 Hb_001488_190 Hb_002045_080--Hb_001488_190 Hb_002173_050 Hb_002173_050 Hb_002045_080--Hb_002173_050 Hb_012090_030 Hb_012090_030 Hb_002045_080--Hb_012090_030 Hb_003164_010 Hb_003164_010 Hb_002045_080--Hb_003164_010 Hb_000357_140 Hb_000357_140 Hb_059554_010--Hb_000357_140 Hb_017908_010 Hb_017908_010 Hb_059554_010--Hb_017908_010 Hb_015934_050 Hb_015934_050 Hb_059554_010--Hb_015934_050 Hb_001105_120 Hb_001105_120 Hb_059554_010--Hb_001105_120 Hb_133279_010 Hb_133279_010 Hb_059554_010--Hb_133279_010 Hb_001300_250 Hb_001300_250 Hb_001728_120--Hb_001300_250 Hb_001728_120--Hb_003164_010 Hb_003073_090 Hb_003073_090 Hb_001728_120--Hb_003073_090 Hb_000834_070 Hb_000834_070 Hb_001728_120--Hb_000834_070 Hb_001587_170 Hb_001587_170 Hb_001728_120--Hb_001587_170 Hb_000454_040 Hb_000454_040 Hb_001488_190--Hb_000454_040 Hb_007534_060 Hb_007534_060 Hb_001488_190--Hb_007534_060 Hb_005622_020 Hb_005622_020 Hb_001488_190--Hb_005622_020 Hb_003197_010 Hb_003197_010 Hb_001488_190--Hb_003197_010 Hb_003813_180 Hb_003813_180 Hb_001488_190--Hb_003813_180 Hb_005470_030 Hb_005470_030 Hb_001488_190--Hb_005470_030 Hb_000077_360 Hb_000077_360 Hb_002173_050--Hb_000077_360 Hb_001310_090 Hb_001310_090 Hb_002173_050--Hb_001310_090 Hb_012833_020 Hb_012833_020 Hb_002173_050--Hb_012833_020 Hb_002173_050--Hb_003073_090 Hb_003878_220 Hb_003878_220 Hb_002173_050--Hb_003878_220 Hb_012090_030--Hb_133279_010 Hb_002498_030 Hb_002498_030 Hb_012090_030--Hb_002498_030 Hb_011861_090 Hb_011861_090 Hb_012090_030--Hb_011861_090 Hb_000302_320 Hb_000302_320 Hb_012090_030--Hb_000302_320 Hb_010883_180 Hb_010883_180 Hb_012090_030--Hb_010883_180 Hb_019516_070 Hb_019516_070 Hb_012090_030--Hb_019516_070 Hb_003164_010--Hb_001587_170 Hb_000367_250 Hb_000367_250 Hb_003164_010--Hb_000367_250 Hb_004007_140 Hb_004007_140 Hb_003164_010--Hb_004007_140 Hb_000856_270 Hb_000856_270 Hb_003164_010--Hb_000856_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0268249 0.293463 0.608392 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.312022 0.0234739 0.34607

CAGE analysis