Hb_002048_070

Information

Type -
Description -
Location Contig2048: 57410-57859
Sequence    

Annotation

kegg
ID rcu:RCOM_1416590
description hypothetical protein
nr
ID KDP45281.1
description hypothetical protein JCGZ_15146 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LA07
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15146 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002048_070 0.0 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
2 Hb_023386_060 0.0688024759 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
3 Hb_000465_350 0.092465411 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2 [Jatropha curcas]
4 Hb_029622_090 0.0930364635 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
5 Hb_010721_010 0.1023332954 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
6 Hb_001663_090 0.1025684899 - - ribonuclease t2, putative [Ricinus communis]
7 Hb_011915_020 0.1082049724 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
8 Hb_004324_100 0.1226407989 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
9 Hb_002676_110 0.1259443313 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
10 Hb_001610_070 0.1287289873 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
11 Hb_000028_330 0.1288300323 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
12 Hb_138086_010 0.1322515711 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
13 Hb_001198_160 0.1342073489 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
14 Hb_001430_010 0.1376759862 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
15 Hb_021576_160 0.1384903175 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
16 Hb_000060_080 0.1418540889 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
17 Hb_004924_020 0.1418801232 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_001832_070 0.1441088752 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
19 Hb_008406_070 0.1452454085 - - PREDICTED: probable protein phosphatase 2C 58 [Jatropha curcas]
20 Hb_004109_110 0.1461486529 - - dioxygenase family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_002048_070 Hb_002048_070 Hb_023386_060 Hb_023386_060 Hb_002048_070--Hb_023386_060 Hb_000465_350 Hb_000465_350 Hb_002048_070--Hb_000465_350 Hb_029622_090 Hb_029622_090 Hb_002048_070--Hb_029622_090 Hb_010721_010 Hb_010721_010 Hb_002048_070--Hb_010721_010 Hb_001663_090 Hb_001663_090 Hb_002048_070--Hb_001663_090 Hb_011915_020 Hb_011915_020 Hb_002048_070--Hb_011915_020 Hb_023386_060--Hb_010721_010 Hb_023386_060--Hb_000465_350 Hb_001430_010 Hb_001430_010 Hb_023386_060--Hb_001430_010 Hb_023386_060--Hb_011915_020 Hb_023386_060--Hb_001663_090 Hb_001141_210 Hb_001141_210 Hb_000465_350--Hb_001141_210 Hb_002676_110 Hb_002676_110 Hb_000465_350--Hb_002676_110 Hb_000060_080 Hb_000060_080 Hb_000465_350--Hb_000060_080 Hb_003968_010 Hb_003968_010 Hb_000465_350--Hb_003968_010 Hb_029622_090--Hb_001663_090 Hb_000028_330 Hb_000028_330 Hb_029622_090--Hb_000028_330 Hb_029622_090--Hb_011915_020 Hb_021576_160 Hb_021576_160 Hb_029622_090--Hb_021576_160 Hb_004324_100 Hb_004324_100 Hb_029622_090--Hb_004324_100 Hb_010721_010--Hb_001430_010 Hb_010721_010--Hb_002676_110 Hb_010721_010--Hb_011915_020 Hb_010721_010--Hb_001663_090 Hb_001663_090--Hb_002676_110 Hb_001663_090--Hb_000028_330 Hb_002739_160 Hb_002739_160 Hb_001663_090--Hb_002739_160 Hb_001663_090--Hb_000060_080 Hb_030827_080 Hb_030827_080 Hb_001663_090--Hb_030827_080 Hb_001610_070 Hb_001610_070 Hb_011915_020--Hb_001610_070 Hb_002374_030 Hb_002374_030 Hb_011915_020--Hb_002374_030 Hb_001198_160 Hb_001198_160 Hb_011915_020--Hb_001198_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 25.8681 23.7258 28.0935 0.0641978 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.160516 0.756492 0.20855 3.39352 2.29671

CAGE analysis