Hb_002049_030

Information

Type -
Description -
Location Contig2049: 17601-19964
Sequence    

Annotation

kegg
ID pop:POPTR_0009s00400g
description hypothetical protein
nr
ID XP_012074630.1
description PREDICTED: uncharacterized protein LOC105635940 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LEW5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10748 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002049_030 0.0 - - PREDICTED: uncharacterized protein LOC105635940 isoform X3 [Jatropha curcas]
2 Hb_138705_010 0.0544154107 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
3 Hb_001019_140 0.0664791871 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
4 Hb_000509_040 0.1061221425 - - hypothetical protein VITISV_009716 [Vitis vinifera]
5 Hb_000991_110 0.1132413923 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
6 Hb_048937_010 0.1153283084 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1 [Nelumbo nucifera]
7 Hb_145268_010 0.1276748946 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
8 Hb_001897_030 0.133000723 - - PREDICTED: actin-depolymerizing factor 5 [Jatropha curcas]
9 Hb_005389_090 0.1366263853 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
10 Hb_000996_100 0.1378129077 - - Nucleotide binding, putative [Theobroma cacao]
11 Hb_005396_110 0.1385527187 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001213_080 0.1418791197 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
13 Hb_041145_010 0.1420273699 - - hypothetical protein CISIN_1g021653mg [Citrus sinensis]
14 Hb_004096_140 0.1441487277 - - Lipase, putative [Ricinus communis]
15 Hb_001628_030 0.1447932934 - - PREDICTED: uncharacterized protein LOC105629266 isoform X1 [Jatropha curcas]
16 Hb_000028_360 0.1507323688 - - ubiquitin-protein ligase, putative [Ricinus communis]
17 Hb_036356_010 0.1538259933 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
18 Hb_003968_010 0.1539655916 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_007403_010 0.1540678942 - - hypothetical protein JCGZ_11090 [Jatropha curcas]
20 Hb_132517_010 0.154082242 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like isoform X3 [Populus euphratica]

Gene co-expression network

sample Hb_002049_030 Hb_002049_030 Hb_138705_010 Hb_138705_010 Hb_002049_030--Hb_138705_010 Hb_001019_140 Hb_001019_140 Hb_002049_030--Hb_001019_140 Hb_000509_040 Hb_000509_040 Hb_002049_030--Hb_000509_040 Hb_000991_110 Hb_000991_110 Hb_002049_030--Hb_000991_110 Hb_048937_010 Hb_048937_010 Hb_002049_030--Hb_048937_010 Hb_145268_010 Hb_145268_010 Hb_002049_030--Hb_145268_010 Hb_138705_010--Hb_001019_140 Hb_000996_100 Hb_000996_100 Hb_138705_010--Hb_000996_100 Hb_003968_010 Hb_003968_010 Hb_138705_010--Hb_003968_010 Hb_004096_140 Hb_004096_140 Hb_138705_010--Hb_004096_140 Hb_138705_010--Hb_048937_010 Hb_001019_140--Hb_004096_140 Hb_001019_140--Hb_048937_010 Hb_001019_140--Hb_145268_010 Hb_001019_140--Hb_003968_010 Hb_005396_110 Hb_005396_110 Hb_000509_040--Hb_005396_110 Hb_005605_030 Hb_005605_030 Hb_000509_040--Hb_005605_030 Hb_001897_030 Hb_001897_030 Hb_000509_040--Hb_001897_030 Hb_000111_150 Hb_000111_150 Hb_000509_040--Hb_000111_150 Hb_132517_010 Hb_132517_010 Hb_000509_040--Hb_132517_010 Hb_006573_060 Hb_006573_060 Hb_000991_110--Hb_006573_060 Hb_000991_110--Hb_001897_030 Hb_005389_090 Hb_005389_090 Hb_000991_110--Hb_005389_090 Hb_000723_060 Hb_000723_060 Hb_000991_110--Hb_000723_060 Hb_007313_050 Hb_007313_050 Hb_000991_110--Hb_007313_050 Hb_048937_010--Hb_145268_010 Hb_048937_010--Hb_004096_140 Hb_001213_080 Hb_001213_080 Hb_048937_010--Hb_001213_080 Hb_000128_090 Hb_000128_090 Hb_048937_010--Hb_000128_090 Hb_002035_020 Hb_002035_020 Hb_048937_010--Hb_002035_020 Hb_145268_010--Hb_000128_090 Hb_008352_020 Hb_008352_020 Hb_145268_010--Hb_008352_020 Hb_010642_010 Hb_010642_010 Hb_145268_010--Hb_010642_010 Hb_001663_090 Hb_001663_090 Hb_145268_010--Hb_001663_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.055217 0.0206408 0.0407997 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00992239 0

CAGE analysis