Hb_002062_010

Information

Type -
Description -
Location Contig2062: 15242-53875
Sequence    

Annotation

kegg
ID rcu:RCOM_0866510
description neutral alpha-glucosidase ab precursor, putative (EC:3.2.1.20)
nr
ID KDP39742.1
description hypothetical protein JCGZ_02762 [Jatropha curcas]
swissprot
ID Q9F234
description Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1
trembl
ID A0A067KUF6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02762 PE=3 SV=1
Gene Ontology
ID GO:0004553
description neutral alpha-glucosidase c-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002062_010 0.0 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
2 Hb_128986_010 0.0479959498 - - conserved hypothetical protein [Ricinus communis]
3 Hb_015561_010 0.052429784 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000017_180 0.0561443409 - - hypothetical protein JCGZ_20551 [Jatropha curcas]
5 Hb_005656_120 0.0570344434 - - PREDICTED: uncharacterized protein LOC105637451 [Jatropha curcas]
6 Hb_003417_050 0.0590476597 - - ankyrin repeat-containing protein, putative [Ricinus communis]
7 Hb_002119_100 0.0595353143 - - cytochrome B561, putative [Ricinus communis]
8 Hb_001512_130 0.0610803959 - - PREDICTED: uncharacterized protein LOC105633633 [Jatropha curcas]
9 Hb_007483_090 0.0637620401 - - conserved hypothetical protein [Ricinus communis]
10 Hb_009023_010 0.0734044666 - - glycosyl hydrolase family 31 family protein [Populus trichocarpa]
11 Hb_000232_040 0.0734881863 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 isoform X2 [Populus euphratica]
12 Hb_136408_040 0.0737642939 - - PREDICTED: protein NDR1 [Jatropha curcas]
13 Hb_007163_110 0.0776702665 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
14 Hb_004459_010 0.0812294243 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
15 Hb_006242_050 0.0812808741 - - Osmotin precursor, putative [Ricinus communis]
16 Hb_000031_180 0.0815221651 - - sarcosine oxidase, putative [Ricinus communis]
17 Hb_143629_170 0.0819797135 - - PREDICTED: pectin acetylesterase 12 [Jatropha curcas]
18 Hb_010589_010 0.0862591862 - - PREDICTED: classical arabinogalactan protein 9-like [Jatropha curcas]
19 Hb_001433_090 0.0864665527 - - Pectinesterase PPE8B precursor, putative [Ricinus communis]
20 Hb_000329_780 0.0875312168 - - hypothetical protein POPTR_0403s00200g [Populus trichocarpa]

Gene co-expression network

sample Hb_002062_010 Hb_002062_010 Hb_128986_010 Hb_128986_010 Hb_002062_010--Hb_128986_010 Hb_015561_010 Hb_015561_010 Hb_002062_010--Hb_015561_010 Hb_000017_180 Hb_000017_180 Hb_002062_010--Hb_000017_180 Hb_005656_120 Hb_005656_120 Hb_002062_010--Hb_005656_120 Hb_003417_050 Hb_003417_050 Hb_002062_010--Hb_003417_050 Hb_002119_100 Hb_002119_100 Hb_002062_010--Hb_002119_100 Hb_128986_010--Hb_003417_050 Hb_143629_170 Hb_143629_170 Hb_128986_010--Hb_143629_170 Hb_001278_120 Hb_001278_120 Hb_128986_010--Hb_001278_120 Hb_128986_010--Hb_005656_120 Hb_007483_090 Hb_007483_090 Hb_128986_010--Hb_007483_090 Hb_001512_130 Hb_001512_130 Hb_015561_010--Hb_001512_130 Hb_015561_010--Hb_002119_100 Hb_009023_010 Hb_009023_010 Hb_015561_010--Hb_009023_010 Hb_015561_010--Hb_003417_050 Hb_015561_010--Hb_007483_090 Hb_005183_050 Hb_005183_050 Hb_000017_180--Hb_005183_050 Hb_000017_180--Hb_003417_050 Hb_000017_180--Hb_005656_120 Hb_000017_180--Hb_128986_010 Hb_000017_180--Hb_007483_090 Hb_005656_120--Hb_003417_050 Hb_005656_120--Hb_015561_010 Hb_007163_110 Hb_007163_110 Hb_005656_120--Hb_007163_110 Hb_003417_050--Hb_007483_090 Hb_003417_050--Hb_002119_100 Hb_003417_050--Hb_143629_170 Hb_002119_100--Hb_007483_090 Hb_000329_780 Hb_000329_780 Hb_002119_100--Hb_000329_780 Hb_002740_050 Hb_002740_050 Hb_002119_100--Hb_002740_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00714564 0.646473 4.30027 10.2126 0.0892645 0.0262698
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.202517 8.96369

CAGE analysis