Hb_002066_100

Information

Type -
Description -
Location Contig2066: 124734-127795
Sequence    

Annotation

kegg
ID rcu:RCOM_0813630
description hypothetical protein
nr
ID XP_012066880.1
description PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]
swissprot
ID Q93YN0
description Protein disulfide-isomerase SCO2 OS=Arabidopsis thaliana GN=SCO2 PE=1 SV=1
trembl
ID A0A067LE01
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01623 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21277: 124862-127782
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002066_100 0.0 - - PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]
2 Hb_000722_030 0.0682951632 - - putative plant disease resistance family protein [Populus trichocarpa]
3 Hb_019053_040 0.0730852876 - - cytochrome P450, putative [Ricinus communis]
4 Hb_023582_010 0.0763856502 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001258_130 0.0777376344 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
6 Hb_027684_010 0.0833416993 - - hypothetical protein RCOM_0504250 [Ricinus communis]
7 Hb_001511_210 0.0837973366 - - PREDICTED: protein ESKIMO 1-like [Jatropha curcas]
8 Hb_003101_020 0.0850944401 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
9 Hb_105148_020 0.0904673627 - - PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]
10 Hb_016297_010 0.0931747628 - - PREDICTED: uncharacterized protein LOC105638665 [Jatropha curcas]
11 Hb_002518_040 0.0941956981 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
12 Hb_001439_050 0.0948360641 - - plastocyanin-like domain-containing family protein [Populus trichocarpa]
13 Hb_174899_010 0.1013161387 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
14 Hb_000358_160 0.1022469465 - - PREDICTED: uncharacterized protein LOC105637769 isoform X1 [Jatropha curcas]
15 Hb_002710_040 0.1042380249 - - PREDICTED: cyclin-D3-3-like [Jatropha curcas]
16 Hb_092516_010 0.1058388205 - - hypothetical protein JCGZ_12248 [Jatropha curcas]
17 Hb_011671_050 0.105855906 - - PREDICTED: F-box protein At5g07670 [Jatropha curcas]
18 Hb_000282_020 0.1083370642 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
19 Hb_021443_060 0.1091001967 - - PTH-1 family protein [Populus trichocarpa]
20 Hb_001655_080 0.1096583665 - - Purple acid phosphatase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_002066_100 Hb_002066_100 Hb_000722_030 Hb_000722_030 Hb_002066_100--Hb_000722_030 Hb_019053_040 Hb_019053_040 Hb_002066_100--Hb_019053_040 Hb_023582_010 Hb_023582_010 Hb_002066_100--Hb_023582_010 Hb_001258_130 Hb_001258_130 Hb_002066_100--Hb_001258_130 Hb_027684_010 Hb_027684_010 Hb_002066_100--Hb_027684_010 Hb_001511_210 Hb_001511_210 Hb_002066_100--Hb_001511_210 Hb_002518_040 Hb_002518_040 Hb_000722_030--Hb_002518_040 Hb_000722_030--Hb_023582_010 Hb_016297_010 Hb_016297_010 Hb_000722_030--Hb_016297_010 Hb_000722_030--Hb_019053_040 Hb_000722_030--Hb_027684_010 Hb_019053_040--Hb_023582_010 Hb_000282_020 Hb_000282_020 Hb_019053_040--Hb_000282_020 Hb_001166_010 Hb_001166_010 Hb_019053_040--Hb_001166_010 Hb_105148_020 Hb_105148_020 Hb_019053_040--Hb_105148_020 Hb_023827_030 Hb_023827_030 Hb_019053_040--Hb_023827_030 Hb_023582_010--Hb_000282_020 Hb_023582_010--Hb_016297_010 Hb_000005_060 Hb_000005_060 Hb_023582_010--Hb_000005_060 Hb_023582_010--Hb_105148_020 Hb_001258_130--Hb_001511_210 Hb_001258_130--Hb_016297_010 Hb_001258_130--Hb_105148_020 Hb_000139_040 Hb_000139_040 Hb_001258_130--Hb_000139_040 Hb_001258_130--Hb_000722_030 Hb_001655_080 Hb_001655_080 Hb_027684_010--Hb_001655_080 Hb_027684_010--Hb_002518_040 Hb_021443_060 Hb_021443_060 Hb_027684_010--Hb_021443_060 Hb_000358_160 Hb_000358_160 Hb_027684_010--Hb_000358_160 Hb_002301_120 Hb_002301_120 Hb_001511_210--Hb_002301_120 Hb_001511_210--Hb_016297_010 Hb_001511_210--Hb_000722_030 Hb_002374_470 Hb_002374_470 Hb_001511_210--Hb_002374_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.151164 0.778241 21.868 8.36559 0 0.0190174
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0494445 0.0388887 0 0.984786 10.4366

CAGE analysis