Hb_002073_190

Information

Type -
Description -
Location Contig2073: 116858-120080
Sequence    

Annotation

kegg
ID rcu:RCOM_0699420
description hypothetical protein
nr
ID XP_012091996.1
description PREDICTED: uncharacterized protein LOC105649812 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JBW4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21738 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21381: 116852-117179 , PASA_asmbl_21383: 119776-120088
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002073_190 0.0 - - PREDICTED: uncharacterized protein LOC105649812 isoform X1 [Jatropha curcas]
2 Hb_000035_470 0.055927007 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
3 Hb_015807_050 0.0667476923 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
4 Hb_000035_110 0.0667802134 - - PREDICTED: transcription initiation factor TFIID subunit 5 [Jatropha curcas]
5 Hb_000000_150 0.0709390505 - - PREDICTED: uncharacterized protein LOC105633730 [Jatropha curcas]
6 Hb_001377_310 0.0711037905 transcription factor TF Family: Coactivator p15 PREDICTED: uncharacterized protein LOC105642839 [Jatropha curcas]
7 Hb_002272_130 0.0714617349 - - PREDICTED: DNA excision repair protein ERCC-1 [Jatropha curcas]
8 Hb_001040_100 0.0724608329 - - PREDICTED: general transcription factor IIH subunit 4 [Jatropha curcas]
9 Hb_004020_040 0.0730079216 - - PREDICTED: GTP-binding protein At3g49725, chloroplastic [Jatropha curcas]
10 Hb_000170_090 0.0731032613 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
11 Hb_000976_140 0.0734442161 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
12 Hb_000313_220 0.0739926518 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
13 Hb_003861_050 0.0765937808 - - PREDICTED: uncharacterized protein LOC105650779 [Jatropha curcas]
14 Hb_021943_080 0.0767531989 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH3 isoform X1 [Jatropha curcas]
15 Hb_002273_120 0.0774075426 - - PREDICTED: probable apyrase 6 [Jatropha curcas]
16 Hb_000737_030 0.0791547112 - - PREDICTED: probable galacturonosyltransferase 3 isoform X1 [Jatropha curcas]
17 Hb_002681_090 0.0792568527 - - PREDICTED: golgin candidate 6 isoform X1 [Jatropha curcas]
18 Hb_002889_010 0.0793721769 - - ubx domain-containing, putative [Ricinus communis]
19 Hb_004319_080 0.0797889808 - - PREDICTED: GPI ethanolamine phosphate transferase 1 [Jatropha curcas]
20 Hb_000302_310 0.0798136364 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]

Gene co-expression network

sample Hb_002073_190 Hb_002073_190 Hb_000035_470 Hb_000035_470 Hb_002073_190--Hb_000035_470 Hb_015807_050 Hb_015807_050 Hb_002073_190--Hb_015807_050 Hb_000035_110 Hb_000035_110 Hb_002073_190--Hb_000035_110 Hb_000000_150 Hb_000000_150 Hb_002073_190--Hb_000000_150 Hb_001377_310 Hb_001377_310 Hb_002073_190--Hb_001377_310 Hb_002272_130 Hb_002272_130 Hb_002073_190--Hb_002272_130 Hb_004319_080 Hb_004319_080 Hb_000035_470--Hb_004319_080 Hb_000035_470--Hb_015807_050 Hb_001021_150 Hb_001021_150 Hb_000035_470--Hb_001021_150 Hb_168978_030 Hb_168978_030 Hb_000035_470--Hb_168978_030 Hb_000976_140 Hb_000976_140 Hb_000035_470--Hb_000976_140 Hb_000313_220 Hb_000313_220 Hb_015807_050--Hb_000313_220 Hb_015807_050--Hb_000976_140 Hb_109980_010 Hb_109980_010 Hb_015807_050--Hb_109980_010 Hb_002849_130 Hb_002849_130 Hb_015807_050--Hb_002849_130 Hb_000258_070 Hb_000258_070 Hb_015807_050--Hb_000258_070 Hb_000035_110--Hb_001377_310 Hb_000005_220 Hb_000005_220 Hb_000035_110--Hb_000005_220 Hb_004020_040 Hb_004020_040 Hb_000035_110--Hb_004020_040 Hb_001635_160 Hb_001635_160 Hb_000035_110--Hb_001635_160 Hb_005460_050 Hb_005460_050 Hb_000035_110--Hb_005460_050 Hb_010150_020 Hb_010150_020 Hb_000035_110--Hb_010150_020 Hb_001232_190 Hb_001232_190 Hb_000000_150--Hb_001232_190 Hb_002374_370 Hb_002374_370 Hb_000000_150--Hb_002374_370 Hb_023313_030 Hb_023313_030 Hb_000000_150--Hb_023313_030 Hb_000000_150--Hb_000035_470 Hb_008616_050 Hb_008616_050 Hb_000000_150--Hb_008616_050 Hb_000170_090 Hb_000170_090 Hb_001377_310--Hb_000170_090 Hb_001377_310--Hb_005460_050 Hb_000373_080 Hb_000373_080 Hb_001377_310--Hb_000373_080 Hb_003861_050 Hb_003861_050 Hb_001377_310--Hb_003861_050 Hb_004586_060 Hb_004586_060 Hb_001377_310--Hb_004586_060 Hb_000462_060 Hb_000462_060 Hb_002272_130--Hb_000462_060 Hb_033642_030 Hb_033642_030 Hb_002272_130--Hb_033642_030 Hb_002272_130--Hb_000035_110 Hb_000200_380 Hb_000200_380 Hb_002272_130--Hb_000200_380 Hb_002398_030 Hb_002398_030 Hb_002272_130--Hb_002398_030 Hb_032986_010 Hb_032986_010 Hb_002272_130--Hb_032986_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.7011 11.5856 19.3513 21.1708 19.7398 19.9562
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.3844 13.2647 8.65513 16.275 16.5723

CAGE analysis