Hb_002081_070

Information

Type -
Description -
Location Contig2081: 142256-162995
Sequence    

Annotation

kegg
ID pop:POPTR_0017s02980g
description hypothetical protein
nr
ID XP_012093146.1
description PREDICTED: pyridoxal kinase [Jatropha curcas]
swissprot
ID Q8W1X2
description Pyridoxal kinase OS=Arabidopsis thaliana GN=PK PE=1 SV=2
trembl
ID A0A067LIQ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16353 PE=4 SV=1
Gene Ontology
ID GO:0008478
description pyridoxal kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21552: 142911-162607 , PASA_asmbl_21553: 161788-162162 , PASA_asmbl_21557: 145694-146336
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002081_070 0.0 - - PREDICTED: pyridoxal kinase [Jatropha curcas]
2 Hb_000030_290 0.1252494018 - - PREDICTED: uncharacterized protein LOC100247068 [Vitis vinifera]
3 Hb_005245_080 0.1358264894 - - PREDICTED: uncharacterized protein LOC105643645 isoform X2 [Jatropha curcas]
4 Hb_001504_050 0.1365709621 - - hypothetical protein POPTR_0001s14840g [Populus trichocarpa]
5 Hb_150651_040 0.1379850687 - - PREDICTED: random slug protein 5-like [Jatropha curcas]
6 Hb_002045_040 0.1397834635 - - PREDICTED: protein OSB2, chloroplastic-like isoform X1 [Jatropha curcas]
7 Hb_003544_020 0.1399138375 - - PREDICTED: elongin-A [Jatropha curcas]
8 Hb_021056_020 0.1408179988 - - plasma membrane H+-ATPase [Hevea brasiliensis]
9 Hb_009711_020 0.1421844314 - - PREDICTED: uncharacterized protein LOC105647794 isoform X2 [Jatropha curcas]
10 Hb_002232_130 0.1424842489 - - -
11 Hb_002609_210 0.1429534534 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]
12 Hb_003018_010 0.1436366638 - - PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Jatropha curcas]
13 Hb_003185_110 0.148531817 - - PREDICTED: cytochrome b-c1 complex subunit 7-2 [Nelumbo nucifera]
14 Hb_000887_020 0.1495541208 - - PREDICTED: uncharacterized protein LOC105633527 [Jatropha curcas]
15 Hb_001221_320 0.1496703074 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-1 isoform X1 [Jatropha curcas]
16 Hb_002876_240 0.1500592988 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic-like [Jatropha curcas]
17 Hb_000000_170 0.1509711086 - - defender against cell death, putative [Ricinus communis]
18 Hb_008686_080 0.1512367707 - - PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Jatropha curcas]
19 Hb_007441_300 0.1519729343 - - ATP binding protein, putative [Ricinus communis]
20 Hb_008695_040 0.1528082448 - - PREDICTED: small ribosomal subunit protein S13, mitochondrial-like [Jatropha curcas]

Gene co-expression network

sample Hb_002081_070 Hb_002081_070 Hb_000030_290 Hb_000030_290 Hb_002081_070--Hb_000030_290 Hb_005245_080 Hb_005245_080 Hb_002081_070--Hb_005245_080 Hb_001504_050 Hb_001504_050 Hb_002081_070--Hb_001504_050 Hb_150651_040 Hb_150651_040 Hb_002081_070--Hb_150651_040 Hb_002045_040 Hb_002045_040 Hb_002081_070--Hb_002045_040 Hb_003544_020 Hb_003544_020 Hb_002081_070--Hb_003544_020 Hb_009711_020 Hb_009711_020 Hb_000030_290--Hb_009711_020 Hb_001616_040 Hb_001616_040 Hb_000030_290--Hb_001616_040 Hb_153544_010 Hb_153544_010 Hb_000030_290--Hb_153544_010 Hb_000334_210 Hb_000334_210 Hb_000030_290--Hb_000334_210 Hb_000331_470 Hb_000331_470 Hb_000030_290--Hb_000331_470 Hb_002609_210 Hb_002609_210 Hb_000030_290--Hb_002609_210 Hb_005245_080--Hb_150651_040 Hb_089995_010 Hb_089995_010 Hb_005245_080--Hb_089995_010 Hb_005391_040 Hb_005391_040 Hb_005245_080--Hb_005391_040 Hb_008013_050 Hb_008013_050 Hb_005245_080--Hb_008013_050 Hb_005245_080--Hb_000030_290 Hb_004724_270 Hb_004724_270 Hb_005245_080--Hb_004724_270 Hb_000699_040 Hb_000699_040 Hb_001504_050--Hb_000699_040 Hb_004052_020 Hb_004052_020 Hb_001504_050--Hb_004052_020 Hb_003058_080 Hb_003058_080 Hb_001504_050--Hb_003058_080 Hb_000451_060 Hb_000451_060 Hb_001504_050--Hb_000451_060 Hb_000191_030 Hb_000191_030 Hb_001504_050--Hb_000191_030 Hb_000297_230 Hb_000297_230 Hb_001504_050--Hb_000297_230 Hb_150651_040--Hb_005391_040 Hb_000529_030 Hb_000529_030 Hb_150651_040--Hb_000529_030 Hb_000457_180 Hb_000457_180 Hb_150651_040--Hb_000457_180 Hb_001279_080 Hb_001279_080 Hb_150651_040--Hb_001279_080 Hb_000465_390 Hb_000465_390 Hb_150651_040--Hb_000465_390 Hb_011381_060 Hb_011381_060 Hb_002045_040--Hb_011381_060 Hb_000805_120 Hb_000805_120 Hb_002045_040--Hb_000805_120 Hb_145880_030 Hb_145880_030 Hb_002045_040--Hb_145880_030 Hb_000251_070 Hb_000251_070 Hb_002045_040--Hb_000251_070 Hb_010407_040 Hb_010407_040 Hb_002045_040--Hb_010407_040 Hb_002374_170 Hb_002374_170 Hb_002045_040--Hb_002374_170 Hb_005773_060 Hb_005773_060 Hb_003544_020--Hb_005773_060 Hb_001221_320 Hb_001221_320 Hb_003544_020--Hb_001221_320 Hb_000186_190 Hb_000186_190 Hb_003544_020--Hb_000186_190 Hb_002811_260 Hb_002811_260 Hb_003544_020--Hb_002811_260 Hb_008686_080 Hb_008686_080 Hb_003544_020--Hb_008686_080 Hb_001814_070 Hb_001814_070 Hb_003544_020--Hb_001814_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.81095 3.00409 19.6392 9.62342 16.3869 12.6118
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
44.0412 31.964 9.08938 13.2494 7.20353

CAGE analysis