Hb_002081_170

Information

Type -
Description -
Location Contig2081: 282976-283962
Sequence    

Annotation

kegg
ID rcu:RCOM_0857550
description Flavonol 3-sulfotransferase, putative (EC:2.8.2.2)
nr
ID XP_002529671.1
description Flavonol 3-sulfotransferase, putative [Ricinus communis]
swissprot
ID Q9M1V2
description Cytosolic sulfotransferase 5 OS=Arabidopsis thaliana GN=SOT5 PE=1 SV=1
trembl
ID B9SUK2
description Sulfotransferase OS=Ricinus communis GN=RCOM_0857550 PE=3 SV=1
Gene Ontology
ID GO:0008146
description flavonol sulfotransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002081_170 0.0 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
2 Hb_044555_010 0.2066126357 - - PREDICTED: choline monooxygenase, chloroplastic isoform X3 [Jatropha curcas]
3 Hb_004200_030 0.2134242678 - - PREDICTED: SWR1 complex subunit 6-like isoform X1 [Citrus sinensis]
4 Hb_004097_040 0.2209660833 - - PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas]
5 Hb_001563_020 0.2334827417 transcription factor TF Family: TRAF aberrant large forked product, putative [Ricinus communis]
6 Hb_033594_070 0.2418212488 - - PREDICTED: uncharacterized protein LOC105787685 isoform X1 [Gossypium raimondii]
7 Hb_007386_010 0.2427684764 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
8 Hb_001529_070 0.2478957002 transcription factor TF Family: AP2 hypothetical protein POPTR_0018s09900g [Populus trichocarpa]
9 Hb_124996_010 0.2548069331 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
10 Hb_000136_160 0.2576490384 - - calmodulin binding protein, putative [Ricinus communis]
11 Hb_006376_010 0.261756711 - - PREDICTED: uncharacterized protein LOC104090718 [Nicotiana tomentosiformis]
12 Hb_000566_020 0.2686139376 - - hypothetical protein POPTR_0001s13520g [Populus trichocarpa]
13 Hb_032974_010 0.2696501383 - - -
14 Hb_021906_010 0.2715852719 - - PREDICTED: cysteine proteinase inhibitor-like [Populus euphratica]
15 Hb_002157_090 0.2727573027 - - hypothetical protein VITISV_041741 [Vitis vinifera]
16 Hb_002259_140 0.2737961908 - - -
17 Hb_000175_580 0.2755705729 transcription factor, desease resistance TF Family: C3H, Gene Name: zf-CCCH hypothetical protein POPTR_0013s00890g [Populus trichocarpa]
18 Hb_001584_030 0.2763525529 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Nelumbo nucifera]
19 Hb_004102_030 0.2779172919 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
20 Hb_004241_010 0.282204917 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]

Gene co-expression network

sample Hb_002081_170 Hb_002081_170 Hb_044555_010 Hb_044555_010 Hb_002081_170--Hb_044555_010 Hb_004200_030 Hb_004200_030 Hb_002081_170--Hb_004200_030 Hb_004097_040 Hb_004097_040 Hb_002081_170--Hb_004097_040 Hb_001563_020 Hb_001563_020 Hb_002081_170--Hb_001563_020 Hb_033594_070 Hb_033594_070 Hb_002081_170--Hb_033594_070 Hb_007386_010 Hb_007386_010 Hb_002081_170--Hb_007386_010 Hb_044555_010--Hb_004097_040 Hb_044555_010--Hb_004200_030 Hb_044555_010--Hb_007386_010 Hb_001979_030 Hb_001979_030 Hb_044555_010--Hb_001979_030 Hb_000136_160 Hb_000136_160 Hb_044555_010--Hb_000136_160 Hb_004200_030--Hb_007386_010 Hb_002259_140 Hb_002259_140 Hb_004200_030--Hb_002259_140 Hb_021906_010 Hb_021906_010 Hb_004200_030--Hb_021906_010 Hb_004200_030--Hb_004097_040 Hb_006376_010 Hb_006376_010 Hb_004097_040--Hb_006376_010 Hb_004097_040--Hb_002259_140 Hb_004097_040--Hb_000136_160 Hb_004097_040--Hb_021906_010 Hb_004097_040--Hb_007386_010 Hb_002157_090 Hb_002157_090 Hb_001563_020--Hb_002157_090 Hb_001584_030 Hb_001584_030 Hb_001563_020--Hb_001584_030 Hb_000603_010 Hb_000603_010 Hb_001563_020--Hb_000603_010 Hb_000414_150 Hb_000414_150 Hb_001563_020--Hb_000414_150 Hb_004241_010 Hb_004241_010 Hb_001563_020--Hb_004241_010 Hb_000566_020 Hb_000566_020 Hb_033594_070--Hb_000566_020 Hb_001529_070 Hb_001529_070 Hb_033594_070--Hb_001529_070 Hb_014834_010 Hb_014834_010 Hb_033594_070--Hb_014834_010 Hb_003581_300 Hb_003581_300 Hb_033594_070--Hb_003581_300 Hb_004102_030 Hb_004102_030 Hb_033594_070--Hb_004102_030 Hb_007386_010--Hb_021906_010 Hb_002099_010 Hb_002099_010 Hb_007386_010--Hb_002099_010 Hb_007386_010--Hb_002259_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.118062 0.473143 1.17448 5.00297 0.0872692 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.63239 4.65888 0 0.130376 0.496795

CAGE analysis