Hb_002092_110

Information

Type -
Description -
Location Contig2092: 143502-144986
Sequence    

Annotation

kegg
ID rcu:RCOM_1617400
description Aspartic proteinase nepenthesin-1 precursor, putative
nr
ID XP_012092987.1
description PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
swissprot
ID Q9LS40
description Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1
trembl
ID A0A067JJE4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05869 PE=4 SV=1
Gene Ontology
ID GO:0004190
description protein aspartic protease in guard cell 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21640: 143435-145709
cDNA
(Sanger)
(ID:Location)		 030_B16.ab1: 143477-144177 , 050_L18.ab1: 143477-143947

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002092_110 0.0 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
2 Hb_000347_270 0.1302785676 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
3 Hb_000853_260 0.1381250097 - - PREDICTED: probable galacturonosyltransferase-like 7 [Jatropha curcas]
4 Hb_003104_040 0.1392782796 - - PREDICTED: insulin-degrading enzyme isoform X1 [Jatropha curcas]
5 Hb_001153_050 0.1398127389 - - PREDICTED: protein FIZZY-RELATED 2 [Jatropha curcas]
6 Hb_002805_060 0.1433002735 - - PREDICTED: signal peptide peptidase [Jatropha curcas]
7 Hb_000156_160 0.1442682507 - - PREDICTED: urease accessory protein G [Jatropha curcas]
8 Hb_002681_170 0.1444585718 - - PREDICTED: probable methyltransferase PMT9 [Jatropha curcas]
9 Hb_073973_150 0.1494071161 - - PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
10 Hb_001191_130 0.1503922179 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic [Jatropha curcas]
11 Hb_137276_010 0.152748743 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
12 Hb_002539_110 0.1566053132 - - hypothetical protein JCGZ_15697 [Jatropha curcas]
13 Hb_000010_270 0.1572590196 - - PREDICTED: vignain [Jatropha curcas]
14 Hb_002311_190 0.1586989295 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
15 Hb_186857_010 0.1589836932 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
16 Hb_018202_050 0.1593462393 - - PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A [Jatropha curcas]
17 Hb_009485_020 0.159845814 - - PREDICTED: membrane steroid-binding protein 2-like [Jatropha curcas]
18 Hb_000175_630 0.1603175464 - - PREDICTED: pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Jatropha curcas]
19 Hb_000172_540 0.1604098136 - - hypothetical protein POPTR_0005s08350g [Populus trichocarpa]
20 Hb_000376_060 0.1605896322 - - PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_002092_110 Hb_002092_110 Hb_000347_270 Hb_000347_270 Hb_002092_110--Hb_000347_270 Hb_000853_260 Hb_000853_260 Hb_002092_110--Hb_000853_260 Hb_003104_040 Hb_003104_040 Hb_002092_110--Hb_003104_040 Hb_001153_050 Hb_001153_050 Hb_002092_110--Hb_001153_050 Hb_002805_060 Hb_002805_060 Hb_002092_110--Hb_002805_060 Hb_000156_160 Hb_000156_160 Hb_002092_110--Hb_000156_160 Hb_018202_050 Hb_018202_050 Hb_000347_270--Hb_018202_050 Hb_000270_160 Hb_000270_160 Hb_000347_270--Hb_000270_160 Hb_004701_050 Hb_004701_050 Hb_000347_270--Hb_004701_050 Hb_002681_170 Hb_002681_170 Hb_000347_270--Hb_002681_170 Hb_000384_080 Hb_000384_080 Hb_000347_270--Hb_000384_080 Hb_000207_190 Hb_000207_190 Hb_000853_260--Hb_000207_190 Hb_000392_370 Hb_000392_370 Hb_000853_260--Hb_000392_370 Hb_001584_370 Hb_001584_370 Hb_000853_260--Hb_001584_370 Hb_000556_150 Hb_000556_150 Hb_000853_260--Hb_000556_150 Hb_003430_090 Hb_003430_090 Hb_000853_260--Hb_003430_090 Hb_073973_150 Hb_073973_150 Hb_003104_040--Hb_073973_150 Hb_012215_010 Hb_012215_010 Hb_003104_040--Hb_012215_010 Hb_005053_010 Hb_005053_010 Hb_003104_040--Hb_005053_010 Hb_010272_010 Hb_010272_010 Hb_003104_040--Hb_010272_010 Hb_000640_070 Hb_000640_070 Hb_003104_040--Hb_000640_070 Hb_002539_110 Hb_002539_110 Hb_003104_040--Hb_002539_110 Hb_006573_160 Hb_006573_160 Hb_001153_050--Hb_006573_160 Hb_001153_050--Hb_073973_150 Hb_002814_110 Hb_002814_110 Hb_001153_050--Hb_002814_110 Hb_011972_020 Hb_011972_020 Hb_001153_050--Hb_011972_020 Hb_005323_010 Hb_005323_010 Hb_001153_050--Hb_005323_010 Hb_005895_010 Hb_005895_010 Hb_001153_050--Hb_005895_010 Hb_027380_030 Hb_027380_030 Hb_002805_060--Hb_027380_030 Hb_002092_100 Hb_002092_100 Hb_002805_060--Hb_002092_100 Hb_000599_170 Hb_000599_170 Hb_002805_060--Hb_000599_170 Hb_003894_040 Hb_003894_040 Hb_002805_060--Hb_003894_040 Hb_002805_060--Hb_002681_170 Hb_002896_060 Hb_002896_060 Hb_002805_060--Hb_002896_060 Hb_000156_160--Hb_002092_100 Hb_005288_080 Hb_005288_080 Hb_000156_160--Hb_005288_080 Hb_000922_020 Hb_000922_020 Hb_000156_160--Hb_000922_020 Hb_016734_090 Hb_016734_090 Hb_000156_160--Hb_016734_090 Hb_000661_020 Hb_000661_020 Hb_000156_160--Hb_000661_020 Hb_011918_050 Hb_011918_050 Hb_000156_160--Hb_011918_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
156.353 67.3952 135.297 141.397 188.262 79.5777
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
47.0536 12.9107 16.2455 52.68 135.525

CAGE analysis