Hb_002097_150

Information

Type -
Description -
Location Contig2097: 236922-238465
Sequence    

Annotation

kegg
ID rcu:RCOM_1353440
description carbonic anhydrase, putative (EC:4.2.1.1)
nr
ID XP_012082604.1
description PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
swissprot
ID Q8L817
description Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=1
trembl
ID B9S0D9
description Carbonic anhydrase, putative OS=Ricinus communis GN=RCOM_1353440 PE=4 SV=1
Gene Ontology
ID GO:0004089
description alpha carbonic anhydrase 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21697: 236965-237686
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002097_150 0.0 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
2 Hb_047833_010 0.0978905987 - - Avr9/Cf-9 rapidly elicited protein [Jatropha curcas]
3 Hb_147137_020 0.1260967988 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
4 Hb_027214_060 0.1358529423 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
5 Hb_004157_080 0.143875904 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT12 [Jatropha curcas]
6 Hb_001025_070 0.1459852514 - - Stachyose synthase precursor, putative [Ricinus communis]
7 Hb_143232_020 0.1523310514 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
8 Hb_000316_150 0.1541593497 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
9 Hb_002486_030 0.1552574876 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
10 Hb_073423_010 0.1555743243 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_104855_020 0.1559618984 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_000227_410 0.1560982547 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
13 Hb_158123_010 0.1563808967 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
14 Hb_008579_010 0.1565461176 - - hypothetical protein JCGZ_01311 [Jatropha curcas]
15 Hb_002475_110 0.157372937 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
16 Hb_002572_060 0.1587126158 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001623_020 0.1591383383 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
18 Hb_142691_010 0.1600793281 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
19 Hb_013726_100 0.1602631711 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
20 Hb_000610_030 0.1607277549 - - hypothetical protein MIMGU_mgv1a0038491mg, partial [Erythranthe guttata]

Gene co-expression network

sample Hb_002097_150 Hb_002097_150 Hb_047833_010 Hb_047833_010 Hb_002097_150--Hb_047833_010 Hb_147137_020 Hb_147137_020 Hb_002097_150--Hb_147137_020 Hb_027214_060 Hb_027214_060 Hb_002097_150--Hb_027214_060 Hb_004157_080 Hb_004157_080 Hb_002097_150--Hb_004157_080 Hb_001025_070 Hb_001025_070 Hb_002097_150--Hb_001025_070 Hb_143232_020 Hb_143232_020 Hb_002097_150--Hb_143232_020 Hb_000142_010 Hb_000142_010 Hb_047833_010--Hb_000142_010 Hb_000563_460 Hb_000563_460 Hb_047833_010--Hb_000563_460 Hb_002311_490 Hb_002311_490 Hb_047833_010--Hb_002311_490 Hb_003053_060 Hb_003053_060 Hb_047833_010--Hb_003053_060 Hb_011671_290 Hb_011671_290 Hb_047833_010--Hb_011671_290 Hb_008579_010 Hb_008579_010 Hb_147137_020--Hb_008579_010 Hb_002486_030 Hb_002486_030 Hb_147137_020--Hb_002486_030 Hb_142691_010 Hb_142691_010 Hb_147137_020--Hb_142691_010 Hb_073423_010 Hb_073423_010 Hb_147137_020--Hb_073423_010 Hb_104855_020 Hb_104855_020 Hb_147137_020--Hb_104855_020 Hb_031862_150 Hb_031862_150 Hb_147137_020--Hb_031862_150 Hb_000227_410 Hb_000227_410 Hb_027214_060--Hb_000227_410 Hb_002475_110 Hb_002475_110 Hb_027214_060--Hb_002475_110 Hb_073870_020 Hb_073870_020 Hb_027214_060--Hb_073870_020 Hb_027214_060--Hb_147137_020 Hb_000904_090 Hb_000904_090 Hb_027214_060--Hb_000904_090 Hb_000347_360 Hb_000347_360 Hb_027214_060--Hb_000347_360 Hb_005946_190 Hb_005946_190 Hb_004157_080--Hb_005946_190 Hb_004117_360 Hb_004117_360 Hb_004157_080--Hb_004117_360 Hb_111908_010 Hb_111908_010 Hb_004157_080--Hb_111908_010 Hb_001514_110 Hb_001514_110 Hb_004157_080--Hb_001514_110 Hb_005725_180 Hb_005725_180 Hb_004157_080--Hb_005725_180 Hb_044026_010 Hb_044026_010 Hb_004157_080--Hb_044026_010 Hb_001025_070--Hb_147137_020 Hb_001025_070--Hb_047833_010 Hb_034132_010 Hb_034132_010 Hb_001025_070--Hb_034132_010 Hb_001025_070--Hb_004157_080 Hb_001565_050 Hb_001565_050 Hb_001025_070--Hb_001565_050 Hb_143232_020--Hb_073423_010 Hb_143232_020--Hb_002486_030 Hb_011111_010 Hb_011111_010 Hb_143232_020--Hb_011111_010 Hb_143232_020--Hb_008579_010 Hb_143232_020--Hb_104855_020 Hb_001623_020 Hb_001623_020 Hb_143232_020--Hb_001623_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.137058 92.722 7.69243 9.09322 0.0771209 0.0242145
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.57484 2.92257 0 0.260197 0.199873

CAGE analysis