Hb_002097_220

Information

Type -
Description -
Location Contig2097: 297191-303925
Sequence    

Annotation

kegg
ID tcc:TCM_037823
description Ankyrin repeat family protein isoform 1
nr
ID XP_011081075.1
description PREDICTED: ankyrin repeat-containing protein At5g02620-like [Sesamum indicum]
swissprot
ID Q9ZU96
description Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=2 SV=1
trembl
ID A0A067JYY1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16565 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002097_220 0.0 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Sesamum indicum]
2 Hb_002685_050 0.3084420271 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
3 Hb_133279_010 0.3189650819 - - spermidine synthase 1, putative [Ricinus communis]
4 Hb_012092_020 0.3252207611 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
5 Hb_002228_080 0.3452295909 - - hypothetical protein JCGZ_12924 [Jatropha curcas]
6 Hb_001377_430 0.3486099864 - - PREDICTED: laccase-6 [Jatropha curcas]
7 Hb_180924_010 0.3576750888 - - CPI-4 [Morus alba var. atropurpurea]
8 Hb_002739_030 0.36030834 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG11 isoform X2 [Cucumis sativus]
9 Hb_008453_040 0.3625937166 - - PREDICTED: expansin-A11 [Jatropha curcas]
10 Hb_000574_300 0.3690420785 - - receptor-kinase, putative [Ricinus communis]
11 Hb_008725_070 0.369767579 - - Cellulose synthase A catalytic subunit 3 [UDP-forming], putative [Ricinus communis]
12 Hb_001818_030 0.3704863296 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
13 Hb_009079_040 0.3708604001 - - BnaA02g30070D [Brassica napus]
14 Hb_002249_010 0.3720830943 - - serine carboxypeptidase, putative [Ricinus communis]
15 Hb_002986_040 0.3746430113 - - PREDICTED: uncharacterized protein LOC105639694 [Jatropha curcas]
16 Hb_000179_260 0.379590786 - - PREDICTED: UBP1-associated proteins 1C isoform X1 [Jatropha curcas]
17 Hb_000157_050 0.3799567152 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000011_310 0.3802155256 - - PREDICTED: uncharacterized protein LOC105631327 [Jatropha curcas]
19 Hb_000640_290 0.3808827721 - - basic helix-loop-helix protein [Populus simonii x Populus nigra]
20 Hb_015475_010 0.382199312 - - hypothetical protein VITISV_034342 [Vitis vinifera]

Gene co-expression network

sample Hb_002097_220 Hb_002097_220 Hb_002685_050 Hb_002685_050 Hb_002097_220--Hb_002685_050 Hb_133279_010 Hb_133279_010 Hb_002097_220--Hb_133279_010 Hb_012092_020 Hb_012092_020 Hb_002097_220--Hb_012092_020 Hb_002228_080 Hb_002228_080 Hb_002097_220--Hb_002228_080 Hb_001377_430 Hb_001377_430 Hb_002097_220--Hb_001377_430 Hb_180924_010 Hb_180924_010 Hb_002097_220--Hb_180924_010 Hb_003638_060 Hb_003638_060 Hb_002685_050--Hb_003638_060 Hb_001818_030 Hb_001818_030 Hb_002685_050--Hb_001818_030 Hb_002685_050--Hb_012092_020 Hb_002999_040 Hb_002999_040 Hb_002685_050--Hb_002999_040 Hb_000010_450 Hb_000010_450 Hb_002685_050--Hb_000010_450 Hb_012090_030 Hb_012090_030 Hb_133279_010--Hb_012090_030 Hb_000389_040 Hb_000389_040 Hb_133279_010--Hb_000389_040 Hb_002498_030 Hb_002498_030 Hb_133279_010--Hb_002498_030 Hb_000574_300 Hb_000574_300 Hb_133279_010--Hb_000574_300 Hb_001105_120 Hb_001105_120 Hb_133279_010--Hb_001105_120 Hb_000011_310 Hb_000011_310 Hb_133279_010--Hb_000011_310 Hb_003164_010 Hb_003164_010 Hb_012092_020--Hb_003164_010 Hb_000243_230 Hb_000243_230 Hb_012092_020--Hb_000243_230 Hb_000856_270 Hb_000856_270 Hb_012092_020--Hb_000856_270 Hb_004007_140 Hb_004007_140 Hb_012092_020--Hb_004007_140 Hb_001491_020 Hb_001491_020 Hb_012092_020--Hb_001491_020 Hb_000071_060 Hb_000071_060 Hb_012092_020--Hb_000071_060 Hb_007110_010 Hb_007110_010 Hb_002228_080--Hb_007110_010 Hb_001486_270 Hb_001486_270 Hb_002228_080--Hb_001486_270 Hb_003589_080 Hb_003589_080 Hb_002228_080--Hb_003589_080 Hb_001597_050 Hb_001597_050 Hb_002228_080--Hb_001597_050 Hb_000157_050 Hb_000157_050 Hb_002228_080--Hb_000157_050 Hb_000173_050 Hb_000173_050 Hb_002228_080--Hb_000173_050 Hb_005539_370 Hb_005539_370 Hb_001377_430--Hb_005539_370 Hb_001621_120 Hb_001621_120 Hb_001377_430--Hb_001621_120 Hb_007810_090 Hb_007810_090 Hb_001377_430--Hb_007810_090 Hb_009748_010 Hb_009748_010 Hb_001377_430--Hb_009748_010 Hb_105959_010 Hb_105959_010 Hb_001377_430--Hb_105959_010 Hb_000100_060 Hb_000100_060 Hb_001377_430--Hb_000100_060 Hb_002986_040 Hb_002986_040 Hb_180924_010--Hb_002986_040 Hb_001199_120 Hb_001199_120 Hb_180924_010--Hb_001199_120 Hb_008453_040 Hb_008453_040 Hb_180924_010--Hb_008453_040 Hb_028621_030 Hb_028621_030 Hb_180924_010--Hb_028621_030 Hb_000009_370 Hb_000009_370 Hb_180924_010--Hb_000009_370 Hb_022958_020 Hb_022958_020 Hb_180924_010--Hb_022958_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0412107 0.0511008 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0173742 0 0.0260714 0 0

CAGE analysis