Hb_002099_010

Information

Type -
Description -
Location Contig2099: 10163-10909
Sequence    

Annotation

kegg
ID csv:101211803
description cysteine proteinase inhibitor 5-like
nr
ID NP_001267677.1
description cysteine proteinase inhibitor 5-like [Cucumis sativus]
swissprot
ID P37842
description Multicystatin OS=Solanum tuberosum PE=1 SV=1
trembl
ID O80389
description Cystein proteinase inhibitor OS=Cucumis sativus PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002099_010 0.0 - - cysteine proteinase inhibitor 5-like [Cucumis sativus]
2 Hb_021906_010 0.1450398639 - - PREDICTED: cysteine proteinase inhibitor-like [Populus euphratica]
3 Hb_007386_010 0.1491936488 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
4 Hb_000123_200 0.1756012119 - - PREDICTED: WAT1-related protein At2g39510 [Jatropha curcas]
5 Hb_160366_010 0.1782915151 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
6 Hb_002259_140 0.2398014585 - - -
7 Hb_000175_580 0.2502291921 transcription factor, desease resistance TF Family: C3H, Gene Name: zf-CCCH hypothetical protein POPTR_0013s00890g [Populus trichocarpa]
8 Hb_156554_010 0.2566290927 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
9 Hb_004200_030 0.2595826534 - - PREDICTED: SWR1 complex subunit 6-like isoform X1 [Citrus sinensis]
10 Hb_007416_040 0.2692823996 - - glutamate receptor 2 plant, putative [Ricinus communis]
11 Hb_001348_200 0.2785872747 - - -
12 Hb_004097_040 0.2803240061 - - PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas]
13 Hb_011349_010 0.2859804052 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
14 Hb_003120_100 0.2892713031 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
15 Hb_101319_020 0.2947036161 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
16 Hb_001529_070 0.2959313284 transcription factor TF Family: AP2 hypothetical protein POPTR_0018s09900g [Populus trichocarpa]
17 Hb_000975_270 0.298158257 - - PREDICTED: histone H2B.11-like [Phoenix dactylifera]
18 Hb_001911_070 0.2992749733 - - -
19 Hb_012163_030 0.3054278671 - - PREDICTED: uncharacterized protein LOC105647861 [Jatropha curcas]
20 Hb_004241_010 0.3139615672 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]

Gene co-expression network

sample Hb_002099_010 Hb_002099_010 Hb_021906_010 Hb_021906_010 Hb_002099_010--Hb_021906_010 Hb_007386_010 Hb_007386_010 Hb_002099_010--Hb_007386_010 Hb_000123_200 Hb_000123_200 Hb_002099_010--Hb_000123_200 Hb_160366_010 Hb_160366_010 Hb_002099_010--Hb_160366_010 Hb_002259_140 Hb_002259_140 Hb_002099_010--Hb_002259_140 Hb_000175_580 Hb_000175_580 Hb_002099_010--Hb_000175_580 Hb_021906_010--Hb_007386_010 Hb_021906_010--Hb_002259_140 Hb_004200_030 Hb_004200_030 Hb_021906_010--Hb_004200_030 Hb_004097_040 Hb_004097_040 Hb_021906_010--Hb_004097_040 Hb_021906_010--Hb_000175_580 Hb_007386_010--Hb_004200_030 Hb_007386_010--Hb_002259_140 Hb_007386_010--Hb_004097_040 Hb_044555_010 Hb_044555_010 Hb_007386_010--Hb_044555_010 Hb_000123_200--Hb_160366_010 Hb_007416_040 Hb_007416_040 Hb_000123_200--Hb_007416_040 Hb_011349_010 Hb_011349_010 Hb_000123_200--Hb_011349_010 Hb_000123_200--Hb_000175_580 Hb_156554_010 Hb_156554_010 Hb_000123_200--Hb_156554_010 Hb_160366_010--Hb_007416_040 Hb_160366_010--Hb_000175_580 Hb_160366_010--Hb_011349_010 Hb_160366_010--Hb_156554_010 Hb_002259_140--Hb_004200_030 Hb_002259_140--Hb_004097_040 Hb_001911_070 Hb_001911_070 Hb_002259_140--Hb_001911_070 Hb_004241_010 Hb_004241_010 Hb_002259_140--Hb_004241_010 Hb_001529_070 Hb_001529_070 Hb_000175_580--Hb_001529_070 Hb_141408_010 Hb_141408_010 Hb_000175_580--Hb_141408_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.823927 0.214723 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.5636 1.56329 0 0 0

CAGE analysis