Hb_002111_070

Information

Type -
Description -
Location Contig2111: 80590-94210
Sequence    

Annotation

kegg
ID pop:POPTR_0025s00390g
description hypothetical protein
nr
ID XP_012081141.1
description PREDICTED: protein S-acyltransferase 24 [Jatropha curcas]
swissprot
ID Q52T38
description Protein S-acyltransferase 24 OS=Arabidopsis thaliana GN=PAT24 PE=2 SV=1
trembl
ID A0A067KDB6
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_16992 PE=3 SV=1
Gene Ontology
ID GO:0005768
description protein s-acyltransferase 24

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21902: 82534-82983
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002111_070 0.0 - - PREDICTED: protein S-acyltransferase 24 [Jatropha curcas]
2 Hb_000703_150 0.0611946592 - - PREDICTED: F-box/LRR-repeat MAX2 homolog A [Jatropha curcas]
3 Hb_000080_150 0.069288436 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
4 Hb_002043_140 0.0761837375 - - PREDICTED: uncharacterized protein At1g51745-like [Jatropha curcas]
5 Hb_009615_170 0.0771370015 - - PREDICTED: sphingoid long-chain bases kinase 1 isoform X1 [Jatropha curcas]
6 Hb_000941_130 0.0779083416 - - gamma-tubulin complex component, putative [Ricinus communis]
7 Hb_000890_210 0.0789669528 - - PREDICTED: serine/threonine-protein kinase PBS1 isoform X1 [Eucalyptus grandis]
8 Hb_004545_140 0.0817078831 - - hypothetical protein JCGZ_23405 [Jatropha curcas]
9 Hb_004676_010 0.0832571717 - - PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Jatropha curcas]
10 Hb_004117_310 0.0837873922 - - PREDICTED: uncharacterized protein LOC105648043 [Jatropha curcas]
11 Hb_000856_310 0.0838537931 - - PREDICTED: hypersensitive-induced response protein 1 [Jatropha curcas]
12 Hb_000071_030 0.0849594775 - - PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Jatropha curcas]
13 Hb_003370_030 0.0868479384 - - PREDICTED: uncharacterized protein LOC105635547 isoform X2 [Jatropha curcas]
14 Hb_000680_090 0.0871054319 - - Protein SEY1, putative [Ricinus communis]
15 Hb_000070_080 0.0872533911 - - PREDICTED: uncharacterized protein LOC105645742 isoform X2 [Jatropha curcas]
16 Hb_001318_020 0.0880258791 - - HAT dimerization domain-containing protein isoform 2 [Theobroma cacao]
17 Hb_000922_370 0.0880470627 - - PREDICTED: uncharacterized protein LOC105640366 [Jatropha curcas]
18 Hb_000107_490 0.0884123017 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Jatropha curcas]
19 Hb_005000_260 0.0884536464 - - recA family protein [Populus trichocarpa]
20 Hb_005321_020 0.0885274463 - - splicing factor-related family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_002111_070 Hb_002111_070 Hb_000703_150 Hb_000703_150 Hb_002111_070--Hb_000703_150 Hb_000080_150 Hb_000080_150 Hb_002111_070--Hb_000080_150 Hb_002043_140 Hb_002043_140 Hb_002111_070--Hb_002043_140 Hb_009615_170 Hb_009615_170 Hb_002111_070--Hb_009615_170 Hb_000941_130 Hb_000941_130 Hb_002111_070--Hb_000941_130 Hb_000890_210 Hb_000890_210 Hb_002111_070--Hb_000890_210 Hb_004676_010 Hb_004676_010 Hb_000703_150--Hb_004676_010 Hb_000739_100 Hb_000739_100 Hb_000703_150--Hb_000739_100 Hb_000390_320 Hb_000390_320 Hb_000703_150--Hb_000390_320 Hb_000083_120 Hb_000083_120 Hb_000703_150--Hb_000083_120 Hb_000703_150--Hb_009615_170 Hb_001377_270 Hb_001377_270 Hb_000080_150--Hb_001377_270 Hb_000366_120 Hb_000366_120 Hb_000080_150--Hb_000366_120 Hb_003640_040 Hb_003640_040 Hb_000080_150--Hb_003640_040 Hb_004195_200 Hb_004195_200 Hb_000080_150--Hb_004195_200 Hb_001248_060 Hb_001248_060 Hb_000080_150--Hb_001248_060 Hb_000976_210 Hb_000976_210 Hb_002043_140--Hb_000976_210 Hb_011491_010 Hb_011491_010 Hb_002043_140--Hb_011491_010 Hb_002006_040 Hb_002006_040 Hb_002043_140--Hb_002006_040 Hb_008103_060 Hb_008103_060 Hb_002043_140--Hb_008103_060 Hb_007163_120 Hb_007163_120 Hb_002043_140--Hb_007163_120 Hb_002043_140--Hb_009615_170 Hb_001821_090 Hb_001821_090 Hb_009615_170--Hb_001821_090 Hb_012395_140 Hb_012395_140 Hb_009615_170--Hb_012395_140 Hb_004884_150 Hb_004884_150 Hb_009615_170--Hb_004884_150 Hb_159558_010 Hb_159558_010 Hb_009615_170--Hb_159558_010 Hb_000579_230 Hb_000579_230 Hb_009615_170--Hb_000579_230 Hb_000174_060 Hb_000174_060 Hb_009615_170--Hb_000174_060 Hb_002890_090 Hb_002890_090 Hb_000941_130--Hb_002890_090 Hb_004109_030 Hb_004109_030 Hb_000941_130--Hb_004109_030 Hb_000941_130--Hb_009615_170 Hb_157966_010 Hb_157966_010 Hb_000941_130--Hb_157966_010 Hb_003729_030 Hb_003729_030 Hb_000941_130--Hb_003729_030 Hb_000107_490 Hb_000107_490 Hb_000890_210--Hb_000107_490 Hb_001341_170 Hb_001341_170 Hb_000890_210--Hb_001341_170 Hb_002213_070 Hb_002213_070 Hb_000890_210--Hb_002213_070 Hb_000890_210--Hb_000083_120 Hb_004117_310 Hb_004117_310 Hb_000890_210--Hb_004117_310 Hb_000245_040 Hb_000245_040 Hb_000890_210--Hb_000245_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.4025 23.8138 8.8734 17.5787 16.6496 21.969
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.1894 10.4889 20.0445 19.83 9.41896

CAGE analysis