Hb_002127_010

Information

Type -
Description -
Location Contig2127: 12448-14713
Sequence    

Annotation

kegg
ID tcc:TCM_041254
description Aluminum activated malate transporter family protein, putative
nr
ID XP_007015680.1
description Aluminum activated malate transporter family protein, putative [Theobroma cacao]
swissprot
ID Q9SJE8
description Aluminum-activated malate transporter 2 OS=Arabidopsis thaliana GN=ALMT2 PE=2 SV=2
trembl
ID A0A061GZM6
description Aluminum activated malate transporter family protein, putative OS=Theobroma cacao GN=TCM_041254 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002127_010 0.0 - - Aluminum activated malate transporter family protein, putative [Theobroma cacao]
2 Hb_168436_010 0.008551683 - - PREDICTED: probable receptor-like protein kinase At1g67000-like [Citrus sinensis]
3 Hb_001268_360 0.009159449 - - PREDICTED: uncharacterized protein LOC104447679 [Eucalyptus grandis]
4 Hb_021409_060 0.0132764996 - - PREDICTED: aluminum-activated malate transporter 10-like [Jatropha curcas]
5 Hb_010896_010 0.016250476 - - -
6 Hb_067197_020 0.0273846522 - - -
7 Hb_004899_160 0.0342118514 - - -
8 Hb_156055_020 0.0419490728 - - conserved hypothetical protein [Ricinus communis]
9 Hb_081445_010 0.0475118298 - - hypothetical protein JCGZ_04541 [Jatropha curcas]
10 Hb_101733_020 0.0481174531 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Jatropha curcas]
11 Hb_119789_010 0.0508274486 - - PREDICTED: uncharacterized protein LOC105134438 [Populus euphratica]
12 Hb_000672_070 0.0573238041 - - PREDICTED: uncharacterized protein LOC105631678 [Jatropha curcas]
13 Hb_048826_010 0.0683816655 transcription factor TF Family: MYB-related PREDICTED: transcription factor MYB28-like [Jatropha curcas]
14 Hb_002582_090 0.0710372056 - - PREDICTED: cinnamoyl-CoA reductase 1-like [Sesamum indicum]
15 Hb_000896_140 0.072398353 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
16 Hb_007040_030 0.0730077559 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
17 Hb_000926_170 0.0795309911 - - conserved hypothetical protein [Ricinus communis]
18 Hb_132148_010 0.0806919838 - - hypothetical protein CICLE_v10006890mg, partial [Citrus clementina]
19 Hb_003766_030 0.10608134 - - PREDICTED: nuclear transport factor 2-like [Gossypium raimondii]
20 Hb_001373_120 0.1104479868 - - Uncharacterized protein TCM_031358 [Theobroma cacao]

Gene co-expression network

sample Hb_002127_010 Hb_002127_010 Hb_168436_010 Hb_168436_010 Hb_002127_010--Hb_168436_010 Hb_001268_360 Hb_001268_360 Hb_002127_010--Hb_001268_360 Hb_021409_060 Hb_021409_060 Hb_002127_010--Hb_021409_060 Hb_010896_010 Hb_010896_010 Hb_002127_010--Hb_010896_010 Hb_067197_020 Hb_067197_020 Hb_002127_010--Hb_067197_020 Hb_004899_160 Hb_004899_160 Hb_002127_010--Hb_004899_160 Hb_168436_010--Hb_021409_060 Hb_168436_010--Hb_001268_360 Hb_168436_010--Hb_010896_010 Hb_168436_010--Hb_004899_160 Hb_156055_020 Hb_156055_020 Hb_168436_010--Hb_156055_020 Hb_001268_360--Hb_010896_010 Hb_001268_360--Hb_067197_020 Hb_001268_360--Hb_021409_060 Hb_081445_010 Hb_081445_010 Hb_001268_360--Hb_081445_010 Hb_021409_060--Hb_004899_160 Hb_021409_060--Hb_156055_020 Hb_021409_060--Hb_010896_010 Hb_010896_010--Hb_067197_020 Hb_010896_010--Hb_081445_010 Hb_067197_020--Hb_081445_010 Hb_101733_020 Hb_101733_020 Hb_067197_020--Hb_101733_020 Hb_000672_070 Hb_000672_070 Hb_067197_020--Hb_000672_070 Hb_004899_160--Hb_156055_020 Hb_119789_010 Hb_119789_010 Hb_004899_160--Hb_119789_010 Hb_000896_140 Hb_000896_140 Hb_004899_160--Hb_000896_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0621983 0.0122674 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis