Hb_002131_030

Information

Type -
Description -
Location Contig2131: 60873-70255
Sequence    

Annotation

kegg
ID pop:POPTR_0003s08700g
description Pyruvate kinase isozyme G family protein
nr
ID XP_012070551.1
description PREDICTED: pyruvate kinase isozyme G, chloroplastic [Jatropha curcas]
swissprot
ID Q40546
description Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
trembl
ID A0A067KTF0
description Pyruvate kinase OS=Jatropha curcas GN=JCGZ_05072 PE=3 SV=1
Gene Ontology
ID GO:0000287
description pyruvate kinase isozyme chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22066: 64576-70229
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002131_030 0.0 - - PREDICTED: pyruvate kinase isozyme G, chloroplastic [Jatropha curcas]
2 Hb_000197_220 0.1322009986 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
3 Hb_000203_140 0.139855104 - - PREDICTED: peroxisome biogenesis protein 7 [Jatropha curcas]
4 Hb_100886_010 0.1431841499 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
5 Hb_002338_050 0.1432087386 - - PREDICTED: uncharacterized protein LOC105118489 isoform X1 [Populus euphratica]
6 Hb_001221_340 0.1432243951 - - hypothetical protein EUGRSUZ_B00102 [Eucalyptus grandis]
7 Hb_000510_240 0.1443354701 desease resistance Gene Name: PRK ATP binding protein, putative [Ricinus communis]
8 Hb_000215_360 0.1522781646 - - Uncharacterized protein isoform 2 [Theobroma cacao]
9 Hb_001910_010 0.1543556892 - - Dual specificity protein phosphatase, putative [Ricinus communis]
10 Hb_094970_010 0.1548681514 - - PREDICTED: quinolinate synthase, chloroplastic [Jatropha curcas]
11 Hb_000286_200 0.1549823425 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]
12 Hb_000914_100 0.155482045 - - unknown [Glycine max]
13 Hb_020025_010 0.1590963356 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
14 Hb_000204_070 0.1595327399 - - PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like [Jatropha curcas]
15 Hb_000159_130 0.160370873 - - RNA binding protein, putative [Ricinus communis]
16 Hb_000035_480 0.1614185271 - - PREDICTED: probable protein phosphatase 2C 59 [Jatropha curcas]
17 Hb_012022_170 0.1621065727 transcription factor TF Family: HMG DNA-binding protein MNB1B, putative [Ricinus communis]
18 Hb_002235_100 0.1622468943 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 4 isoform X1 [Jatropha curcas]
19 Hb_000122_210 0.1624914583 - - -
20 Hb_000227_070 0.1659924476 - - PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_002131_030 Hb_002131_030 Hb_000197_220 Hb_000197_220 Hb_002131_030--Hb_000197_220 Hb_000203_140 Hb_000203_140 Hb_002131_030--Hb_000203_140 Hb_100886_010 Hb_100886_010 Hb_002131_030--Hb_100886_010 Hb_002338_050 Hb_002338_050 Hb_002131_030--Hb_002338_050 Hb_001221_340 Hb_001221_340 Hb_002131_030--Hb_001221_340 Hb_000510_240 Hb_000510_240 Hb_002131_030--Hb_000510_240 Hb_000914_100 Hb_000914_100 Hb_000197_220--Hb_000914_100 Hb_004785_080 Hb_004785_080 Hb_000197_220--Hb_004785_080 Hb_000896_050 Hb_000896_050 Hb_000197_220--Hb_000896_050 Hb_003106_190 Hb_003106_190 Hb_000197_220--Hb_003106_190 Hb_001098_050 Hb_001098_050 Hb_000197_220--Hb_001098_050 Hb_000010_290 Hb_000010_290 Hb_000197_220--Hb_000010_290 Hb_000286_200 Hb_000286_200 Hb_000203_140--Hb_000286_200 Hb_000203_140--Hb_001221_340 Hb_000203_140--Hb_100886_010 Hb_005227_040 Hb_005227_040 Hb_000203_140--Hb_005227_040 Hb_004897_010 Hb_004897_010 Hb_000203_140--Hb_004897_010 Hb_000465_070 Hb_000465_070 Hb_100886_010--Hb_000465_070 Hb_000035_480 Hb_000035_480 Hb_100886_010--Hb_000035_480 Hb_140627_010 Hb_140627_010 Hb_100886_010--Hb_140627_010 Hb_000072_200 Hb_000072_200 Hb_100886_010--Hb_000072_200 Hb_003020_260 Hb_003020_260 Hb_100886_010--Hb_003020_260 Hb_000457_290 Hb_000457_290 Hb_100886_010--Hb_000457_290 Hb_004480_100 Hb_004480_100 Hb_002338_050--Hb_004480_100 Hb_007023_030 Hb_007023_030 Hb_002338_050--Hb_007023_030 Hb_003467_030 Hb_003467_030 Hb_002338_050--Hb_003467_030 Hb_001242_130 Hb_001242_130 Hb_002338_050--Hb_001242_130 Hb_002768_060 Hb_002768_060 Hb_002338_050--Hb_002768_060 Hb_000789_200 Hb_000789_200 Hb_002338_050--Hb_000789_200 Hb_001452_210 Hb_001452_210 Hb_001221_340--Hb_001452_210 Hb_007973_010 Hb_007973_010 Hb_001221_340--Hb_007973_010 Hb_002908_060 Hb_002908_060 Hb_001221_340--Hb_002908_060 Hb_000053_060 Hb_000053_060 Hb_001221_340--Hb_000053_060 Hb_001953_080 Hb_001953_080 Hb_001221_340--Hb_001953_080 Hb_000227_070 Hb_000227_070 Hb_000510_240--Hb_000227_070 Hb_016522_010 Hb_016522_010 Hb_000510_240--Hb_016522_010 Hb_000210_120 Hb_000210_120 Hb_000510_240--Hb_000210_120 Hb_002193_030 Hb_002193_030 Hb_000510_240--Hb_002193_030 Hb_000103_270 Hb_000103_270 Hb_000510_240--Hb_000103_270 Hb_005914_170 Hb_005914_170 Hb_000510_240--Hb_005914_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.38581 4.19667 3.80579 4.19395 3.04386 5.61376
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.38204 11.7547 5.56335 15.2955 16.8424

CAGE analysis