Hb_002148_020

Information

Type -
Description -
Location Contig2148: 40548-42535
Sequence    

Annotation

kegg
ID rcu:RCOM_1158010
description aldo-keto reductase, putative (EC:1.1.1.21)
nr
ID XP_002529872.1
description aldo-keto reductase, putative [Ricinus communis]
swissprot
ID Q0PGJ6
description Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1
trembl
ID B9SV53
description Aldo-keto reductase, putative OS=Ricinus communis GN=RCOM_1158010 PE=4 SV=1
Gene Ontology
ID GO:0004033
description aldo-keto reductase family 4 member c9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22157: 40769-42492
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002148_020 0.0 - - aldo-keto reductase, putative [Ricinus communis]
2 Hb_131967_010 0.130794616 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
3 Hb_006698_040 0.1420489007 - - bHLH1 transcription factor [Hevea brasiliensis]
4 Hb_000025_630 0.1475380451 - - PREDICTED: uncharacterized protein LOC105635952 [Jatropha curcas]
5 Hb_122548_010 0.1501514109 - - acyl-CoA oxidase, putative [Ricinus communis]
6 Hb_088163_010 0.1523611359 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
7 Hb_085972_010 0.1536203008 transcription factor TF Family: NAC NAC transcription factor 066 [Jatropha curcas]
8 Hb_001767_130 0.1542390949 - - PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
9 Hb_001922_050 0.1546389372 - - PREDICTED: F-box protein At5g52880 [Jatropha curcas]
10 Hb_007403_060 0.1570917604 - - PREDICTED: CAAX prenyl protease 2 [Jatropha curcas]
11 Hb_000696_010 0.1590324252 - - RING-H2 finger protein ATL4M, putative [Ricinus communis]
12 Hb_000676_080 0.1638956696 - - PREDICTED: uncharacterized WD repeat-containing protein C17D11.16 [Jatropha curcas]
13 Hb_000022_050 0.1638977479 - - PREDICTED: retinol dehydrogenase 11-like isoform X2 [Glycine max]
14 Hb_002983_080 0.1662660761 - - acetylornithine aminotransferase, partial [Prunus persica]
15 Hb_003940_040 0.1663162051 - - conserved hypothetical protein [Ricinus communis]
16 Hb_074715_010 0.1666861566 - - PREDICTED: disease resistance protein RPS6-like isoform X2 [Jatropha curcas]
17 Hb_000025_180 0.1678464243 - - hypothetical protein CISIN_1g024241mg [Citrus sinensis]
18 Hb_172632_120 0.1702776 - - conserved hypothetical protein [Ricinus communis]
19 Hb_034552_030 0.1726582913 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]
20 Hb_024879_010 0.1727204832 - - unknown [Glycine max]

Gene co-expression network

sample Hb_002148_020 Hb_002148_020 Hb_131967_010 Hb_131967_010 Hb_002148_020--Hb_131967_010 Hb_006698_040 Hb_006698_040 Hb_002148_020--Hb_006698_040 Hb_000025_630 Hb_000025_630 Hb_002148_020--Hb_000025_630 Hb_122548_010 Hb_122548_010 Hb_002148_020--Hb_122548_010 Hb_088163_010 Hb_088163_010 Hb_002148_020--Hb_088163_010 Hb_085972_010 Hb_085972_010 Hb_002148_020--Hb_085972_010 Hb_000001_190 Hb_000001_190 Hb_131967_010--Hb_000001_190 Hb_005754_010 Hb_005754_010 Hb_131967_010--Hb_005754_010 Hb_003464_080 Hb_003464_080 Hb_131967_010--Hb_003464_080 Hb_000530_010 Hb_000530_010 Hb_131967_010--Hb_000530_010 Hb_001769_080 Hb_001769_080 Hb_131967_010--Hb_001769_080 Hb_084646_010 Hb_084646_010 Hb_006698_040--Hb_084646_010 Hb_001584_120 Hb_001584_120 Hb_006698_040--Hb_001584_120 Hb_155159_020 Hb_155159_020 Hb_006698_040--Hb_155159_020 Hb_006698_040--Hb_000025_630 Hb_187679_010 Hb_187679_010 Hb_006698_040--Hb_187679_010 Hb_172632_120 Hb_172632_120 Hb_006698_040--Hb_172632_120 Hb_000025_630--Hb_172632_120 Hb_012322_020 Hb_012322_020 Hb_000025_630--Hb_012322_020 Hb_000025_180 Hb_000025_180 Hb_000025_630--Hb_000025_180 Hb_002235_210 Hb_002235_210 Hb_000025_630--Hb_002235_210 Hb_001699_100 Hb_001699_100 Hb_000025_630--Hb_001699_100 Hb_007441_190 Hb_007441_190 Hb_000025_630--Hb_007441_190 Hb_002983_080 Hb_002983_080 Hb_122548_010--Hb_002983_080 Hb_015026_130 Hb_015026_130 Hb_122548_010--Hb_015026_130 Hb_006502_030 Hb_006502_030 Hb_122548_010--Hb_006502_030 Hb_001405_210 Hb_001405_210 Hb_122548_010--Hb_001405_210 Hb_000120_550 Hb_000120_550 Hb_122548_010--Hb_000120_550 Hb_004055_050 Hb_004055_050 Hb_122548_010--Hb_004055_050 Hb_075764_010 Hb_075764_010 Hb_088163_010--Hb_075764_010 Hb_001767_130 Hb_001767_130 Hb_088163_010--Hb_001767_130 Hb_000230_180 Hb_000230_180 Hb_088163_010--Hb_000230_180 Hb_099878_050 Hb_099878_050 Hb_088163_010--Hb_099878_050 Hb_090158_010 Hb_090158_010 Hb_088163_010--Hb_090158_010 Hb_165402_010 Hb_165402_010 Hb_088163_010--Hb_165402_010 Hb_006643_020 Hb_006643_020 Hb_085972_010--Hb_006643_020 Hb_001911_040 Hb_001911_040 Hb_085972_010--Hb_001911_040 Hb_001829_040 Hb_001829_040 Hb_085972_010--Hb_001829_040 Hb_000022_050 Hb_000022_050 Hb_085972_010--Hb_000022_050 Hb_001396_110 Hb_001396_110 Hb_085972_010--Hb_001396_110 Hb_005686_120 Hb_005686_120 Hb_085972_010--Hb_005686_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.27264 2.21008 2.56557 9.45027 2.46335 4.21496
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.06293 4.08643 1.57688 6.01181 0.700782

CAGE analysis