Hb_002150_100

Information

Type -
Description -
Location Contig2150: 88581-90603
Sequence    

Annotation

kegg
ID rcu:RCOM_1690740
description aldose 1-epimerase, putative
nr
ID XP_012086775.1
description PREDICTED: putative glucose-6-phosphate 1-epimerase isoform X1 [Jatropha curcas]
swissprot
ID Q40784
description Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1
trembl
ID A0A067JZB2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20496 PE=4 SV=1
Gene Ontology
ID GO:0016853
description glucose-6-phosphate 1-epimerase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002150_100 0.0 - - PREDICTED: putative glucose-6-phosphate 1-epimerase isoform X1 [Jatropha curcas]
2 Hb_003411_120 0.1886382688 - - hypothetical protein POPTR_0010s13670g [Populus trichocarpa]
3 Hb_010457_040 0.1957784845 - - PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
4 Hb_002119_140 0.1973098027 - - PREDICTED: uncharacterized protein LOC105634172 [Jatropha curcas]
5 Hb_001097_080 0.2153696771 transcription factor TF Family: MYB-related triptychon and cpc, putative [Ricinus communis]
6 Hb_005914_130 0.2153878851 - - -
7 Hb_001758_090 0.2248845519 - - hypothetical protein POPTR_0006s09110g [Populus trichocarpa]
8 Hb_094529_020 0.2317051087 - - leucine-rich repeat containing protein, putative [Ricinus communis]
9 Hb_001153_070 0.2357662115 - - -
10 Hb_001216_060 0.2412359394 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000617_300 0.2464038538 - - RALFL33, putative [Ricinus communis]
12 Hb_003813_010 0.2475208658 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 1-like [Jatropha curcas]
13 Hb_147137_010 0.2514921324 - - hypothetical protein JCGZ_07229 [Jatropha curcas]
14 Hb_000115_200 0.2538124885 - - PREDICTED: endonuclease 2 [Jatropha curcas]
15 Hb_000011_250 0.2545359037 - - PREDICTED: RING-H2 finger protein ATL3-like [Jatropha curcas]
16 Hb_001157_210 0.2564053597 - - hypothetical protein CISIN_1g038260mg [Citrus sinensis]
17 Hb_080192_010 0.2597774985 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
18 Hb_001102_310 0.2601949859 - - Protein AFR, putative [Ricinus communis]
19 Hb_017914_020 0.2616553082 - - -
20 Hb_007574_040 0.2626357619 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]

Gene co-expression network

sample Hb_002150_100 Hb_002150_100 Hb_003411_120 Hb_003411_120 Hb_002150_100--Hb_003411_120 Hb_010457_040 Hb_010457_040 Hb_002150_100--Hb_010457_040 Hb_002119_140 Hb_002119_140 Hb_002150_100--Hb_002119_140 Hb_001097_080 Hb_001097_080 Hb_002150_100--Hb_001097_080 Hb_005914_130 Hb_005914_130 Hb_002150_100--Hb_005914_130 Hb_001758_090 Hb_001758_090 Hb_002150_100--Hb_001758_090 Hb_003411_120--Hb_001097_080 Hb_000617_300 Hb_000617_300 Hb_003411_120--Hb_000617_300 Hb_147137_010 Hb_147137_010 Hb_003411_120--Hb_147137_010 Hb_003371_030 Hb_003371_030 Hb_003411_120--Hb_003371_030 Hb_003411_120--Hb_005914_130 Hb_001804_020 Hb_001804_020 Hb_003411_120--Hb_001804_020 Hb_010457_040--Hb_005914_130 Hb_010457_040--Hb_001758_090 Hb_025161_060 Hb_025161_060 Hb_010457_040--Hb_025161_060 Hb_025557_080 Hb_025557_080 Hb_010457_040--Hb_025557_080 Hb_000046_390 Hb_000046_390 Hb_010457_040--Hb_000046_390 Hb_001221_450 Hb_001221_450 Hb_002119_140--Hb_001221_450 Hb_000099_140 Hb_000099_140 Hb_002119_140--Hb_000099_140 Hb_002374_410 Hb_002374_410 Hb_002119_140--Hb_002374_410 Hb_007574_040 Hb_007574_040 Hb_002119_140--Hb_007574_040 Hb_022092_080 Hb_022092_080 Hb_002119_140--Hb_022092_080 Hb_001097_080--Hb_147137_010 Hb_007382_130 Hb_007382_130 Hb_001097_080--Hb_007382_130 Hb_000470_060 Hb_000470_060 Hb_001097_080--Hb_000470_060 Hb_012799_080 Hb_012799_080 Hb_001097_080--Hb_012799_080 Hb_016734_050 Hb_016734_050 Hb_001097_080--Hb_016734_050 Hb_000482_080 Hb_000482_080 Hb_005914_130--Hb_000482_080 Hb_005914_130--Hb_001758_090 Hb_000291_240 Hb_000291_240 Hb_005914_130--Hb_000291_240 Hb_007311_050 Hb_007311_050 Hb_005914_130--Hb_007311_050 Hb_004657_070 Hb_004657_070 Hb_001758_090--Hb_004657_070 Hb_001758_090--Hb_000617_300 Hb_000428_040 Hb_000428_040 Hb_001758_090--Hb_000428_040 Hb_003055_100 Hb_003055_100 Hb_001758_090--Hb_003055_100 Hb_001758_090--Hb_007574_040 Hb_000622_190 Hb_000622_190 Hb_001758_090--Hb_000622_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.173912 0.256626 7.73916 0 0.0341685
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.56064 0 0.0765499 1.12066

CAGE analysis