Hb_002151_070

Information

Type -
Description -
Location Contig2151: 76662-77571
Sequence    

Annotation

kegg
ID rcu:RCOM_0944380
description small heat-shock protein, putative
nr
ID XP_012076263.1
description PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Jatropha curcas]
swissprot
ID Q9M670
description Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=2 SV=1
trembl
ID A0A067KH18
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12842 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002151_070 0.0 - - PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Jatropha curcas]
2 Hb_001140_290 0.040581112 - - hypothetical protein JCGZ_26107 [Jatropha curcas]
3 Hb_005000_150 0.0590259412 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000103_440 0.0676035217 - - hypothetical protein POPTR_0008s15900g [Populus trichocarpa]
5 Hb_000813_070 0.0715347462 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005711_030 0.0795213326 - - hypothetical protein RCOM_0460020 [Ricinus communis]
7 Hb_001289_070 0.0809791738 - - PREDICTED: protein YLS9-like [Jatropha curcas]
8 Hb_003058_240 0.0820260891 - - PREDICTED: tubulin beta-5 chain-like [Jatropha curcas]
9 Hb_001514_050 0.0822003171 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
10 Hb_015807_130 0.0831603608 - - PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
11 Hb_138977_010 0.0832620347 - - unnamed protein product [Vitis vinifera]
12 Hb_003152_020 0.0851915844 - - PREDICTED: neutral alpha-glucosidase C [Jatropha curcas]
13 Hb_008461_060 0.0870989816 - - hypothetical protein JCGZ_17379 [Jatropha curcas]
14 Hb_002809_180 0.0880559771 - - PREDICTED: homeobox protein HD1 [Jatropha curcas]
15 Hb_002835_360 0.0896375607 transcription factor TF Family: MYB hypothetical protein POPTR_0015s09430g [Populus trichocarpa]
16 Hb_020375_010 0.0931331931 - - PREDICTED: transcription factor IBH1 [Jatropha curcas]
17 Hb_001688_050 0.0939524175 - - PREDICTED: reticulon-like protein B9 [Jatropha curcas]
18 Hb_002078_180 0.0950520637 - - PREDICTED: 65-kDa microtubule-associated protein 8 [Jatropha curcas]
19 Hb_010589_010 0.0952628564 - - PREDICTED: classical arabinogalactan protein 9-like [Jatropha curcas]
20 Hb_001511_220 0.097529241 - - hypothetical protein POPTR_0008s06990g [Populus trichocarpa]

Gene co-expression network

sample Hb_002151_070 Hb_002151_070 Hb_001140_290 Hb_001140_290 Hb_002151_070--Hb_001140_290 Hb_005000_150 Hb_005000_150 Hb_002151_070--Hb_005000_150 Hb_000103_440 Hb_000103_440 Hb_002151_070--Hb_000103_440 Hb_000813_070 Hb_000813_070 Hb_002151_070--Hb_000813_070 Hb_005711_030 Hb_005711_030 Hb_002151_070--Hb_005711_030 Hb_001289_070 Hb_001289_070 Hb_002151_070--Hb_001289_070 Hb_001140_290--Hb_005000_150 Hb_138977_010 Hb_138977_010 Hb_001140_290--Hb_138977_010 Hb_002809_180 Hb_002809_180 Hb_001140_290--Hb_002809_180 Hb_001140_290--Hb_000103_440 Hb_010589_010 Hb_010589_010 Hb_001140_290--Hb_010589_010 Hb_001514_050 Hb_001514_050 Hb_005000_150--Hb_001514_050 Hb_003152_020 Hb_003152_020 Hb_005000_150--Hb_003152_020 Hb_001397_020 Hb_001397_020 Hb_005000_150--Hb_001397_020 Hb_005000_150--Hb_001289_070 Hb_003058_240 Hb_003058_240 Hb_000103_440--Hb_003058_240 Hb_000103_440--Hb_002809_180 Hb_000103_440--Hb_005711_030 Hb_000103_440--Hb_003152_020 Hb_000813_070--Hb_005711_030 Hb_000813_070--Hb_001289_070 Hb_020375_010 Hb_020375_010 Hb_000813_070--Hb_020375_010 Hb_001279_400 Hb_001279_400 Hb_000813_070--Hb_001279_400 Hb_001688_050 Hb_001688_050 Hb_000813_070--Hb_001688_050 Hb_005711_030--Hb_001289_070 Hb_133974_010 Hb_133974_010 Hb_005711_030--Hb_133974_010 Hb_004650_120 Hb_004650_120 Hb_005711_030--Hb_004650_120 Hb_000017_180 Hb_000017_180 Hb_005711_030--Hb_000017_180 Hb_015807_130 Hb_015807_130 Hb_001289_070--Hb_015807_130 Hb_001289_070--Hb_003152_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0393152 0.720321 1.93172 10.3046 0.0738298 0.0349534
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.146157 8.53835

CAGE analysis