Hb_002184_100

Information

Type -
Description -
Location Contig2184: 181793-182403
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa020120mg
description hypothetical protein
nr
ID XP_007226707.1
description hypothetical protein PRUPE_ppa020120mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5XQU7
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020120mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002184_100 0.0 - - hypothetical protein PRUPE_ppa020120mg [Prunus persica]
2 Hb_003589_070 0.1955991839 - - PREDICTED: uncharacterized protein LOC104242373 [Nicotiana sylvestris]
3 Hb_089173_010 0.2239283109 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
4 Hb_008370_010 0.2480404447 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_006806_010 0.2641927164 - - -
6 Hb_054362_010 0.2648785465 - - PREDICTED: uncharacterized protein LOC105650428 [Jatropha curcas]
7 Hb_127993_010 0.2674963114 - - PREDICTED: choline monooxygenase, chloroplastic isoform X4 [Jatropha curcas]
8 Hb_169574_010 0.2784062779 - - PREDICTED: uncharacterized protein LOC104120373 [Nicotiana tomentosiformis]
9 Hb_048874_010 0.2791922936 - - hypothetical protein POPTR_0016s10870g [Populus trichocarpa]
10 Hb_005799_040 0.2812118633 - - PREDICTED: bidirectional sugar transporter SWEET4-like isoform X1 [Gossypium raimondii]
11 Hb_008246_050 0.2812271436 - - -
12 Hb_000115_300 0.3002166361 - - -
13 Hb_009421_010 0.3006770974 - - -
14 Hb_162126_010 0.3073970464 - - -
15 Hb_001956_030 0.3149444968 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Populus euphratica]
16 Hb_000430_010 0.3172473242 - - -
17 Hb_008779_010 0.3204006966 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
18 Hb_001549_030 0.3232388925 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
19 Hb_125847_010 0.3260383023 - - -
20 Hb_008643_010 0.3269454115 - - hypothetical protein JCGZ_04298 [Jatropha curcas]

Gene co-expression network

sample Hb_002184_100 Hb_002184_100 Hb_003589_070 Hb_003589_070 Hb_002184_100--Hb_003589_070 Hb_089173_010 Hb_089173_010 Hb_002184_100--Hb_089173_010 Hb_008370_010 Hb_008370_010 Hb_002184_100--Hb_008370_010 Hb_006806_010 Hb_006806_010 Hb_002184_100--Hb_006806_010 Hb_054362_010 Hb_054362_010 Hb_002184_100--Hb_054362_010 Hb_127993_010 Hb_127993_010 Hb_002184_100--Hb_127993_010 Hb_000115_300 Hb_000115_300 Hb_003589_070--Hb_000115_300 Hb_004117_300 Hb_004117_300 Hb_003589_070--Hb_004117_300 Hb_181476_010 Hb_181476_010 Hb_003589_070--Hb_181476_010 Hb_000917_140 Hb_000917_140 Hb_003589_070--Hb_000917_140 Hb_038005_010 Hb_038005_010 Hb_003589_070--Hb_038005_010 Hb_001956_030 Hb_001956_030 Hb_089173_010--Hb_001956_030 Hb_089173_010--Hb_006806_010 Hb_008246_050 Hb_008246_050 Hb_089173_010--Hb_008246_050 Hb_005799_040 Hb_005799_040 Hb_089173_010--Hb_005799_040 Hb_048874_010 Hb_048874_010 Hb_089173_010--Hb_048874_010 Hb_169574_010 Hb_169574_010 Hb_089173_010--Hb_169574_010 Hb_009421_010 Hb_009421_010 Hb_008370_010--Hb_009421_010 Hb_005532_010 Hb_005532_010 Hb_008370_010--Hb_005532_010 Hb_161929_010 Hb_161929_010 Hb_008370_010--Hb_161929_010 Hb_021616_010 Hb_021616_010 Hb_008370_010--Hb_021616_010 Hb_010142_080 Hb_010142_080 Hb_008370_010--Hb_010142_080 Hb_008370_010--Hb_089173_010 Hb_125847_010 Hb_125847_010 Hb_006806_010--Hb_125847_010 Hb_000430_010 Hb_000430_010 Hb_006806_010--Hb_000430_010 Hb_162126_010 Hb_162126_010 Hb_006806_010--Hb_162126_010 Hb_168311_010 Hb_168311_010 Hb_006806_010--Hb_168311_010 Hb_000139_440 Hb_000139_440 Hb_006806_010--Hb_000139_440 Hb_054362_010--Hb_127993_010 Hb_054362_010--Hb_169574_010 Hb_054362_010--Hb_048874_010 Hb_054362_010--Hb_005799_040 Hb_054362_010--Hb_008246_050 Hb_054362_010--Hb_162126_010 Hb_127993_010--Hb_169574_010 Hb_127993_010--Hb_048874_010 Hb_127993_010--Hb_005799_040 Hb_127993_010--Hb_008246_050 Hb_127993_010--Hb_162126_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0870836 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.271261 0.29823 0

CAGE analysis