Hb_002193_050

Information

Type -
Description -
Location Contig2193: 49337-52679
Sequence    

Annotation

kegg
ID cit:102630367
description cytochrome P450 93A1-like
nr
ID XP_006485017.1
description PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
swissprot
ID Q42798
description 3,9-dihydroxypterocarpan 6A-monooxygenase OS=Glycine max GN=CYP93A1 PE=1 SV=1
trembl
ID B9T2D1
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0405180 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 93a3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002193_050 0.0 - - PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
2 Hb_000473_010 0.0772018288 - - PREDICTED: galactolipase DONGLE, chloroplastic [Jatropha curcas]
3 Hb_000699_200 0.0810270426 - - hypothetical protein POPTR_0019s02340g [Populus trichocarpa]
4 Hb_003683_090 0.0907274306 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
5 Hb_022630_010 0.0940281647 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
6 Hb_005648_030 0.0999238455 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH18-like [Jatropha curcas]
7 Hb_000890_190 0.1061447789 - - glutaredoxin, grx, putative [Ricinus communis]
8 Hb_001405_260 0.1075154343 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
9 Hb_078477_010 0.1081131313 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
10 Hb_001403_070 0.1103480931 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Populus euphratica]
11 Hb_044026_010 0.1133635295 - - PREDICTED: cytochrome P450 93A3-like [Jatropha curcas]
12 Hb_005643_020 0.1143960775 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
13 Hb_002290_100 0.1287546409 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
14 Hb_001511_130 0.1375850902 - - PREDICTED: taxadien-5-alpha-ol O-acetyltransferase [Jatropha curcas]
15 Hb_005588_010 0.1385332243 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
16 Hb_007850_050 0.1385402103 - - flavonoid 3-hydroxylase, putative [Ricinus communis]
17 Hb_189242_010 0.141287937 - - hypothetical protein B456_013G0075002, partial [Gossypium raimondii]
18 Hb_006124_040 0.1430097999 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
19 Hb_001749_020 0.1440289819 - - hypothetical protein CISIN_1g042220mg, partial [Citrus sinensis]
20 Hb_110048_010 0.1459518114 - - PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_002193_050 Hb_002193_050 Hb_000473_010 Hb_000473_010 Hb_002193_050--Hb_000473_010 Hb_000699_200 Hb_000699_200 Hb_002193_050--Hb_000699_200 Hb_003683_090 Hb_003683_090 Hb_002193_050--Hb_003683_090 Hb_022630_010 Hb_022630_010 Hb_002193_050--Hb_022630_010 Hb_005648_030 Hb_005648_030 Hb_002193_050--Hb_005648_030 Hb_000890_190 Hb_000890_190 Hb_002193_050--Hb_000890_190 Hb_000473_010--Hb_000699_200 Hb_000473_010--Hb_003683_090 Hb_000473_010--Hb_000890_190 Hb_002290_100 Hb_002290_100 Hb_000473_010--Hb_002290_100 Hb_001511_130 Hb_001511_130 Hb_000473_010--Hb_001511_130 Hb_000699_200--Hb_003683_090 Hb_000699_200--Hb_000890_190 Hb_000699_200--Hb_001511_130 Hb_006124_040 Hb_006124_040 Hb_000699_200--Hb_006124_040 Hb_003683_090--Hb_000890_190 Hb_003683_090--Hb_006124_040 Hb_000510_350 Hb_000510_350 Hb_003683_090--Hb_000510_350 Hb_078477_010 Hb_078477_010 Hb_022630_010--Hb_078477_010 Hb_022630_010--Hb_005648_030 Hb_004656_030 Hb_004656_030 Hb_022630_010--Hb_004656_030 Hb_027913_010 Hb_027913_010 Hb_022630_010--Hb_027913_010 Hb_001403_070 Hb_001403_070 Hb_022630_010--Hb_001403_070 Hb_005648_030--Hb_078477_010 Hb_001405_260 Hb_001405_260 Hb_005648_030--Hb_001405_260 Hb_044026_010 Hb_044026_010 Hb_005648_030--Hb_044026_010 Hb_005588_010 Hb_005588_010 Hb_005648_030--Hb_005588_010 Hb_033153_010 Hb_033153_010 Hb_005648_030--Hb_033153_010 Hb_000890_190--Hb_000510_350 Hb_168039_020 Hb_168039_020 Hb_000890_190--Hb_168039_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.5137 0.133006 0.0199598 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0718628 0

CAGE analysis