Hb_002217_390

Information

Type -
Description -
Location Contig2217: 326391-331706
Sequence    

Annotation

kegg
ID rcu:RCOM_1001220
description galactokinase, putative (EC:2.7.1.157)
nr
ID XP_012084112.1
description PREDICTED: galactokinase [Jatropha curcas]
swissprot
ID Q9SEE5
description Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2
trembl
ID A0A067JVE4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19026 PE=3 SV=1
Gene Ontology
ID GO:0005737
description galactokinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002217_390 0.0 - - PREDICTED: galactokinase [Jatropha curcas]
2 Hb_001963_110 0.1526645208 - - -
3 Hb_001971_050 0.1639678826 - - WD-repeat protein, putative [Ricinus communis]
4 Hb_001677_230 0.1661556531 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
5 Hb_000215_250 0.1680974343 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
6 Hb_003092_050 0.1715539244 - - PREDICTED: putative chloride channel-like protein CLC-g [Jatropha curcas]
7 Hb_025668_020 0.1759985456 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002811_020 0.1781312255 - - Cysteine synthase [Morus notabilis]
9 Hb_000454_150 0.178326182 transcription factor TF Family: C3H tRNA-dihydrouridine synthase, putative [Ricinus communis]
10 Hb_000139_510 0.179081394 - - PREDICTED: probable E3 ubiquitin-protein ligase LUL4 isoform X1 [Jatropha curcas]
11 Hb_000714_120 0.1807409437 - - PREDICTED: vacuolar-sorting receptor 6-like [Jatropha curcas]
12 Hb_002893_190 0.1809157234 - - unnamed protein product [Coffea canephora]
13 Hb_001894_010 0.1847102432 - - PREDICTED: probable polygalacturonase non-catalytic subunit JP650 [Jatropha curcas]
14 Hb_000137_060 0.1861250138 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
15 Hb_001496_120 0.1865489461 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
16 Hb_002888_060 0.186729518 - - PREDICTED: phospholipase SGR2 isoform X1 [Jatropha curcas]
17 Hb_012033_010 0.1894397363 - - PREDICTED: histone H1.2-like [Jatropha curcas]
18 Hb_062013_010 0.191088738 - - phosphoprotein phosphatase, putative [Ricinus communis]
19 Hb_000594_130 0.1929935141 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_013848_030 0.193839802 - - PREDICTED: probable aminotransferase TAT2 [Jatropha curcas]

Gene co-expression network

sample Hb_002217_390 Hb_002217_390 Hb_001963_110 Hb_001963_110 Hb_002217_390--Hb_001963_110 Hb_001971_050 Hb_001971_050 Hb_002217_390--Hb_001971_050 Hb_001677_230 Hb_001677_230 Hb_002217_390--Hb_001677_230 Hb_000215_250 Hb_000215_250 Hb_002217_390--Hb_000215_250 Hb_003092_050 Hb_003092_050 Hb_002217_390--Hb_003092_050 Hb_025668_020 Hb_025668_020 Hb_002217_390--Hb_025668_020 Hb_000442_170 Hb_000442_170 Hb_001963_110--Hb_000442_170 Hb_002308_060 Hb_002308_060 Hb_001963_110--Hb_002308_060 Hb_003992_220 Hb_003992_220 Hb_001963_110--Hb_003992_220 Hb_001963_110--Hb_001677_230 Hb_000776_020 Hb_000776_020 Hb_001963_110--Hb_000776_020 Hb_002888_060 Hb_002888_060 Hb_001963_110--Hb_002888_060 Hb_001737_040 Hb_001737_040 Hb_001971_050--Hb_001737_040 Hb_029510_090 Hb_029510_090 Hb_001971_050--Hb_029510_090 Hb_001778_040 Hb_001778_040 Hb_001971_050--Hb_001778_040 Hb_013848_030 Hb_013848_030 Hb_001971_050--Hb_013848_030 Hb_000254_060 Hb_000254_060 Hb_001971_050--Hb_000254_060 Hb_004785_090 Hb_004785_090 Hb_001971_050--Hb_004785_090 Hb_001677_230--Hb_002888_060 Hb_001619_010 Hb_001619_010 Hb_001677_230--Hb_001619_010 Hb_082683_010 Hb_082683_010 Hb_001677_230--Hb_082683_010 Hb_006096_020 Hb_006096_020 Hb_001677_230--Hb_006096_020 Hb_033594_100 Hb_033594_100 Hb_001677_230--Hb_033594_100 Hb_002420_010 Hb_002420_010 Hb_000215_250--Hb_002420_010 Hb_002811_020 Hb_002811_020 Hb_000215_250--Hb_002811_020 Hb_000215_250--Hb_013848_030 Hb_000215_250--Hb_003092_050 Hb_001493_020 Hb_001493_020 Hb_000215_250--Hb_001493_020 Hb_000215_250--Hb_082683_010 Hb_001894_010 Hb_001894_010 Hb_003092_050--Hb_001894_010 Hb_000107_550 Hb_000107_550 Hb_003092_050--Hb_000107_550 Hb_000139_510 Hb_000139_510 Hb_003092_050--Hb_000139_510 Hb_005181_060 Hb_005181_060 Hb_003092_050--Hb_005181_060 Hb_003092_050--Hb_013848_030 Hb_007676_060 Hb_007676_060 Hb_025668_020--Hb_007676_060 Hb_000751_070 Hb_000751_070 Hb_025668_020--Hb_000751_070 Hb_000567_150 Hb_000567_150 Hb_025668_020--Hb_000567_150 Hb_170878_060 Hb_170878_060 Hb_025668_020--Hb_170878_060 Hb_001519_240 Hb_001519_240 Hb_025668_020--Hb_001519_240 Hb_025668_020--Hb_003992_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.268284 0.676443 0.780813 1.0865 0.164529 0.194593
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0176888 0 2.42078 2.31797

CAGE analysis