Hb_002221_010

Information

Type -
Description -
Location Contig2221: 16540-19736
Sequence    

Annotation

kegg
ID rcu:RCOM_0580310
description adenylsulfate kinase, putative (EC:1.3.1.74)
nr
ID XP_012079406.1
description PREDICTED: adenylyl-sulfate kinase 3-like [Jatropha curcas]
swissprot
ID Q43295
description Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=APK1 PE=1 SV=1
trembl
ID A0A067KII0
description Adenylyl-sulfate kinase OS=Jatropha curcas GN=JCGZ_12536 PE=3 SV=1
Gene Ontology
ID GO:0004020
description adenylyl-sulfate kinase 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22995: 16531-20375
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002221_010 0.0 - - PREDICTED: adenylyl-sulfate kinase 3-like [Jatropha curcas]
2 Hb_000115_190 0.1328872297 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
3 Hb_002693_040 0.1599522295 - - hypersensitive-induced response protein [Carica papaya]
4 Hb_001279_050 0.1616387347 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
5 Hb_005162_120 0.1660920571 - - ferric reductase oxidase [Manihot esculenta]
6 Hb_002218_050 0.1675589614 - - SSXT family protein isoform 2, partial [Theobroma cacao]
7 Hb_114292_010 0.1675667457 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002307_040 0.1686713991 - - DNA binding protein, putative [Ricinus communis]
9 Hb_008948_090 0.1702602277 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
10 Hb_001040_050 0.1709899132 - - Stem-specific protein TSJT1, putative [Ricinus communis]
11 Hb_007002_050 0.1728793876 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
12 Hb_000388_040 0.1735022296 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
13 Hb_010288_050 0.1754232406 - - PREDICTED: uncharacterized protein LOC105642604 [Jatropha curcas]
14 Hb_000748_100 0.1786849833 - - hypothetical protein POPTR_0002s06160g [Populus trichocarpa]
15 Hb_004586_310 0.1810679492 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000367_240 0.1813835301 - - hypothetical protein JCGZ_11682 [Jatropha curcas]
17 Hb_000215_150 0.1826364009 - - PREDICTED: uncharacterized protein LOC100249186 [Vitis vinifera]
18 Hb_011360_130 0.1856813935 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000028_250 0.1869463214 - - PREDICTED: nudix hydrolase 4 [Jatropha curcas]
20 Hb_044662_050 0.1871820376 - - hypothetical protein POPTR_0002s08440g [Populus trichocarpa]

Gene co-expression network

sample Hb_002221_010 Hb_002221_010 Hb_000115_190 Hb_000115_190 Hb_002221_010--Hb_000115_190 Hb_002693_040 Hb_002693_040 Hb_002221_010--Hb_002693_040 Hb_001279_050 Hb_001279_050 Hb_002221_010--Hb_001279_050 Hb_005162_120 Hb_005162_120 Hb_002221_010--Hb_005162_120 Hb_002218_050 Hb_002218_050 Hb_002221_010--Hb_002218_050 Hb_114292_010 Hb_114292_010 Hb_002221_010--Hb_114292_010 Hb_001040_050 Hb_001040_050 Hb_000115_190--Hb_001040_050 Hb_000028_250 Hb_000028_250 Hb_000115_190--Hb_000028_250 Hb_006519_020 Hb_006519_020 Hb_000115_190--Hb_006519_020 Hb_002447_060 Hb_002447_060 Hb_000115_190--Hb_002447_060 Hb_000388_040 Hb_000388_040 Hb_000115_190--Hb_000388_040 Hb_000115_190--Hb_005162_120 Hb_010288_050 Hb_010288_050 Hb_002693_040--Hb_010288_050 Hb_007632_200 Hb_007632_200 Hb_002693_040--Hb_007632_200 Hb_000165_270 Hb_000165_270 Hb_002693_040--Hb_000165_270 Hb_002693_040--Hb_002218_050 Hb_008948_090 Hb_008948_090 Hb_002693_040--Hb_008948_090 Hb_028487_120 Hb_028487_120 Hb_001279_050--Hb_028487_120 Hb_000748_100 Hb_000748_100 Hb_001279_050--Hb_000748_100 Hb_002307_040 Hb_002307_040 Hb_001279_050--Hb_002307_040 Hb_000367_240 Hb_000367_240 Hb_001279_050--Hb_000367_240 Hb_000069_400 Hb_000069_400 Hb_001279_050--Hb_000069_400 Hb_005162_120--Hb_000028_250 Hb_002639_170 Hb_002639_170 Hb_005162_120--Hb_002639_170 Hb_005162_120--Hb_002218_050 Hb_007002_050 Hb_007002_050 Hb_005162_120--Hb_007002_050 Hb_001241_020 Hb_001241_020 Hb_005162_120--Hb_001241_020 Hb_002218_050--Hb_000388_040 Hb_002218_050--Hb_114292_010 Hb_002218_050--Hb_001040_050 Hb_001143_200 Hb_001143_200 Hb_002218_050--Hb_001143_200 Hb_002218_050--Hb_000115_190 Hb_001935_040 Hb_001935_040 Hb_114292_010--Hb_001935_040 Hb_000142_030 Hb_000142_030 Hb_114292_010--Hb_000142_030 Hb_114292_010--Hb_000115_190 Hb_000347_160 Hb_000347_160 Hb_114292_010--Hb_000347_160 Hb_114292_010--Hb_000367_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.584986 1.52781 33.7979 3.69411 0.144865 0.201525
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.42684 0.269303 1.06687 0.343793 1.732

CAGE analysis