Hb_002221_050

Information

Type -
Description -
Location Contig2221: 37760-44224
Sequence    

Annotation

kegg
ID rcu:RCOM_0580330
description cyclophilin-10, putative (EC:5.2.1.8)
nr
ID XP_012079408.1
description PREDICTED: peptidyl-prolyl cis-trans isomerase CYP65 isoform X1 [Jatropha curcas]
swissprot
ID Q9FJX0
description Peptidyl-prolyl cis-trans isomerase CYP65 OS=Arabidopsis thaliana GN=CYP65 PE=2 SV=1
trembl
ID A0A067K7H8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12538 PE=4 SV=1
Gene Ontology
ID GO:0003755
description peptidyl-prolyl cis-trans isomerase cyp65 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22999: 38040-43876
cDNA
(Sanger)
(ID:Location)		 020_K02r.ab1: 34826-37505

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002221_050 0.0 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP65 isoform X1 [Jatropha curcas]
2 Hb_000320_380 0.046689738 - - PREDICTED: uncharacterized protein LOC105649330 isoform X2 [Jatropha curcas]
3 Hb_000424_010 0.0528649859 - - PREDICTED: F-box/LRR-repeat protein 15 isoform X1 [Jatropha curcas]
4 Hb_007885_070 0.0541692973 - - cleavage and polyadenylation specificity factor, putative [Ricinus communis]
5 Hb_000529_260 0.0543795436 - - PREDICTED: protein SGT1 homolog At5g65490 [Jatropha curcas]
6 Hb_000320_200 0.0578563041 - - PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Jatropha curcas]
7 Hb_015026_050 0.0584003708 - - XPA-binding protein, putative [Ricinus communis]
8 Hb_001541_020 0.0603776739 - - PREDICTED: uncharacterized protein At3g49055 [Jatropha curcas]
9 Hb_019153_020 0.0606863343 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
10 Hb_000329_130 0.0619402156 - - beta-tubulin cofactor d, putative [Ricinus communis]
11 Hb_000574_440 0.0628917013 - - PREDICTED: uncharacterized protein LOC105634833 [Jatropha curcas]
12 Hb_001771_120 0.0644908526 - - K+ transport growth defect-like protein [Hevea brasiliensis]
13 Hb_000417_160 0.0650095722 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Jatropha curcas]
14 Hb_022408_010 0.0669137941 - - PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 [Jatropha curcas]
15 Hb_006449_050 0.0677389767 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX2-like [Jatropha curcas]
16 Hb_147737_010 0.0685044136 - - PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X2 [Jatropha curcas]
17 Hb_002255_050 0.0696227442 - - PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Jatropha curcas]
18 Hb_000510_310 0.0699232891 transcription factor TF Family: bHLH PREDICTED: transcription factor UNE12-like [Jatropha curcas]
19 Hb_010315_090 0.0702676252 - - suppressor of ty, putative [Ricinus communis]
20 Hb_000107_500 0.0707461142 - - PREDICTED: protein FAR1-RELATED SEQUENCE 9 [Jatropha curcas]

Gene co-expression network

sample Hb_002221_050 Hb_002221_050 Hb_000320_380 Hb_000320_380 Hb_002221_050--Hb_000320_380 Hb_000424_010 Hb_000424_010 Hb_002221_050--Hb_000424_010 Hb_007885_070 Hb_007885_070 Hb_002221_050--Hb_007885_070 Hb_000529_260 Hb_000529_260 Hb_002221_050--Hb_000529_260 Hb_000320_200 Hb_000320_200 Hb_002221_050--Hb_000320_200 Hb_015026_050 Hb_015026_050 Hb_002221_050--Hb_015026_050 Hb_000320_380--Hb_015026_050 Hb_019153_020 Hb_019153_020 Hb_000320_380--Hb_019153_020 Hb_000320_380--Hb_007885_070 Hb_140049_020 Hb_140049_020 Hb_000320_380--Hb_140049_020 Hb_000574_440 Hb_000574_440 Hb_000320_380--Hb_000574_440 Hb_000035_040 Hb_000035_040 Hb_000424_010--Hb_000035_040 Hb_002652_040 Hb_002652_040 Hb_000424_010--Hb_002652_040 Hb_000424_010--Hb_000529_260 Hb_000139_250 Hb_000139_250 Hb_000424_010--Hb_000139_250 Hb_175338_020 Hb_175338_020 Hb_000424_010--Hb_175338_020 Hb_000417_160 Hb_000417_160 Hb_007885_070--Hb_000417_160 Hb_007885_070--Hb_000529_260 Hb_007885_070--Hb_019153_020 Hb_007885_070--Hb_000424_010 Hb_000529_260--Hb_019153_020 Hb_000510_310 Hb_000510_310 Hb_000529_260--Hb_000510_310 Hb_000529_260--Hb_000320_200 Hb_001599_030 Hb_001599_030 Hb_000320_200--Hb_001599_030 Hb_000714_050 Hb_000714_050 Hb_000320_200--Hb_000714_050 Hb_000072_350 Hb_000072_350 Hb_000320_200--Hb_000072_350 Hb_003952_150 Hb_003952_150 Hb_000320_200--Hb_003952_150 Hb_000743_040 Hb_000743_040 Hb_000320_200--Hb_000743_040 Hb_147737_010 Hb_147737_010 Hb_015026_050--Hb_147737_010 Hb_000329_130 Hb_000329_130 Hb_015026_050--Hb_000329_130 Hb_015026_050--Hb_007885_070 Hb_003847_120 Hb_003847_120 Hb_015026_050--Hb_003847_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.5298 22.9391 12.4996 10.0745 37.1343 29.5996
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.3726 10.0806 16.8806 13.1322 13.0946

CAGE analysis