Hb_002232_200

Information

Type -
Description -
Location Contig2232: 153867-155675
Sequence    

Annotation

kegg
ID rcu:RCOM_1683790
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012087224.1
description PREDICTED: sugar carrier protein C-like [Jatropha curcas]
swissprot
ID Q41144
description Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1
trembl
ID A0A067JNE8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20667 PE=3 SV=1
Gene Ontology
ID GO:0016021
description sugar carrier protein c-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002232_200 0.0 - - PREDICTED: sugar carrier protein C-like [Jatropha curcas]
2 Hb_000005_040 0.1363729907 - - PREDICTED: histone H2B.2 [Jatropha curcas]
3 Hb_002900_060 0.1513287228 - - CI small heat shock protein 2 [Prunus salicina]
4 Hb_005730_080 0.1590629054 - - PREDICTED: 17.6 kDa class I heat shock protein-like [Solanum lycopersicum]
5 Hb_002022_050 0.1622847555 - - PREDICTED: O-acyltransferase WSD1-like isoform X1 [Populus euphratica]
6 Hb_002260_190 0.1636570717 - - -
7 Hb_001142_020 0.1814455542 - - -
8 Hb_155911_010 0.1842140131 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
9 Hb_033225_020 0.1859895974 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000362_230 0.1903675803 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_079543_010 0.1987874737 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
12 Hb_002595_100 0.2018609227 - - heat-shock protein, putative [Ricinus communis]
13 Hb_000115_170 0.2157036383 - - hypothetical protein JCGZ_18339 [Jatropha curcas]
14 Hb_002141_010 0.2163896563 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
15 Hb_000227_420 0.2182994723 - - PREDICTED: thermospermine synthase ACAULIS5-like [Jatropha curcas]
16 Hb_001584_230 0.2223039925 - - invertase/pectin methylesterase inhibitor family protein [Populus trichocarpa]
17 Hb_000227_110 0.2242104595 - - hypothetical protein CICLE_v10010500mg, partial [Citrus clementina]
18 Hb_043629_020 0.2268929362 - - hypothetical protein POPTR_0009s13360g [Populus trichocarpa]
19 Hb_007127_010 0.2273931987 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
20 Hb_000123_390 0.2344380761 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002232_200 Hb_002232_200 Hb_000005_040 Hb_000005_040 Hb_002232_200--Hb_000005_040 Hb_002900_060 Hb_002900_060 Hb_002232_200--Hb_002900_060 Hb_005730_080 Hb_005730_080 Hb_002232_200--Hb_005730_080 Hb_002022_050 Hb_002022_050 Hb_002232_200--Hb_002022_050 Hb_002260_190 Hb_002260_190 Hb_002232_200--Hb_002260_190 Hb_001142_020 Hb_001142_020 Hb_002232_200--Hb_001142_020 Hb_000005_040--Hb_002260_190 Hb_000005_040--Hb_002022_050 Hb_000005_040--Hb_002900_060 Hb_002595_100 Hb_002595_100 Hb_000005_040--Hb_002595_100 Hb_000005_040--Hb_001142_020 Hb_002900_060--Hb_002595_100 Hb_002900_060--Hb_002260_190 Hb_002900_060--Hb_002022_050 Hb_002073_070 Hb_002073_070 Hb_002900_060--Hb_002073_070 Hb_005730_080--Hb_000005_040 Hb_005730_080--Hb_002900_060 Hb_005730_080--Hb_002260_190 Hb_005730_080--Hb_002022_050 Hb_005730_080--Hb_002595_100 Hb_002022_050--Hb_002260_190 Hb_002022_050--Hb_002595_100 Hb_002022_050--Hb_001142_020 Hb_155911_010 Hb_155911_010 Hb_002022_050--Hb_155911_010 Hb_002260_190--Hb_002595_100 Hb_002260_190--Hb_001142_020 Hb_002260_190--Hb_155911_010 Hb_001142_020--Hb_155911_010 Hb_000362_230 Hb_000362_230 Hb_001142_020--Hb_000362_230 Hb_079543_010 Hb_079543_010 Hb_001142_020--Hb_079543_010 Hb_002141_010 Hb_002141_010 Hb_001142_020--Hb_002141_010 Hb_000227_110 Hb_000227_110 Hb_001142_020--Hb_000227_110 Hb_000204_180 Hb_000204_180 Hb_001142_020--Hb_000204_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0277972 0 0 0 0.600018 0.109876
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00994582 0

CAGE analysis