Hb_002233_080

Information

Type -
Description -
Location Contig2233: 68056-71293
Sequence    

Annotation

kegg
ID rcu:RCOM_1681370
description leucine-rich repeat-containing protein, putative
nr
ID KDP42425.1
description hypothetical protein JCGZ_00222 [Jatropha curcas]
swissprot
ID Q9SZ67
description Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1
trembl
ID A0A067LD49
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00222 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002233_080 0.0 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
2 Hb_001019_020 0.0961846504 - - conserved hypothetical protein [Ricinus communis]
3 Hb_076771_010 0.1018275494 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
4 Hb_001675_310 0.1191095701 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X1 [Jatropha curcas]
5 Hb_012272_010 0.1281180608 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
6 Hb_004297_080 0.1289705704 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
7 Hb_094437_050 0.1360266988 - - PREDICTED: uncharacterized protein LOC105630877 isoform X2 [Jatropha curcas]
8 Hb_001405_060 0.1421800649 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 4-like [Jatropha curcas]
9 Hb_000594_110 0.1444606973 transcription factor TF Family: RAV DNA-binding protein RAV1, putative [Ricinus communis]
10 Hb_012743_010 0.1470862632 - - phosphate transporter [Manihot esculenta]
11 Hb_000047_010 0.1474731018 - - PREDICTED: expansin-like A1 [Jatropha curcas]
12 Hb_000666_120 0.1476142203 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
13 Hb_001472_140 0.1479419137 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
14 Hb_046109_010 0.1497843228 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
15 Hb_002676_110 0.151385184 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
16 Hb_000210_160 0.1520862374 - - PREDICTED: protein YLS9-like [Jatropha curcas]
17 Hb_001247_160 0.1529578833 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
18 Hb_005048_120 0.1540152094 - - -
19 Hb_164926_050 0.1544860016 - - PREDICTED: subtilisin-like protease SBT3.5 [Jatropha curcas]
20 Hb_010721_010 0.1553286022 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]

Gene co-expression network

sample Hb_002233_080 Hb_002233_080 Hb_001019_020 Hb_001019_020 Hb_002233_080--Hb_001019_020 Hb_076771_010 Hb_076771_010 Hb_002233_080--Hb_076771_010 Hb_001675_310 Hb_001675_310 Hb_002233_080--Hb_001675_310 Hb_012272_010 Hb_012272_010 Hb_002233_080--Hb_012272_010 Hb_004297_080 Hb_004297_080 Hb_002233_080--Hb_004297_080 Hb_094437_050 Hb_094437_050 Hb_002233_080--Hb_094437_050 Hb_001019_020--Hb_094437_050 Hb_001247_160 Hb_001247_160 Hb_001019_020--Hb_001247_160 Hb_000047_010 Hb_000047_010 Hb_001019_020--Hb_000047_010 Hb_001019_020--Hb_012272_010 Hb_011915_020 Hb_011915_020 Hb_001019_020--Hb_011915_020 Hb_002676_110 Hb_002676_110 Hb_076771_010--Hb_002676_110 Hb_001663_090 Hb_001663_090 Hb_076771_010--Hb_001663_090 Hb_029622_090 Hb_029622_090 Hb_076771_010--Hb_029622_090 Hb_000010_220 Hb_000010_220 Hb_076771_010--Hb_000010_220 Hb_010721_010 Hb_010721_010 Hb_076771_010--Hb_010721_010 Hb_000210_160 Hb_000210_160 Hb_001675_310--Hb_000210_160 Hb_003849_200 Hb_003849_200 Hb_001675_310--Hb_003849_200 Hb_000563_630 Hb_000563_630 Hb_001675_310--Hb_000563_630 Hb_000666_120 Hb_000666_120 Hb_001675_310--Hb_000666_120 Hb_003435_040 Hb_003435_040 Hb_001675_310--Hb_003435_040 Hb_005048_120 Hb_005048_120 Hb_012272_010--Hb_005048_120 Hb_012272_010--Hb_010721_010 Hb_007904_290 Hb_007904_290 Hb_012272_010--Hb_007904_290 Hb_001189_150 Hb_001189_150 Hb_012272_010--Hb_001189_150 Hb_002936_030 Hb_002936_030 Hb_012272_010--Hb_002936_030 Hb_001472_140 Hb_001472_140 Hb_004297_080--Hb_001472_140 Hb_008406_030 Hb_008406_030 Hb_004297_080--Hb_008406_030 Hb_004297_080--Hb_000666_120 Hb_004297_080--Hb_000210_160 Hb_004297_080--Hb_001675_310 Hb_002498_250 Hb_002498_250 Hb_094437_050--Hb_002498_250 Hb_000892_030 Hb_000892_030 Hb_094437_050--Hb_000892_030 Hb_005725_280 Hb_005725_280 Hb_094437_050--Hb_005725_280 Hb_002400_040 Hb_002400_040 Hb_094437_050--Hb_002400_040 Hb_094437_050--Hb_000047_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.692403 12.9993 9.47641 13.5182 0.837963 0.723179
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.139775 0.0488849 0.140114 1.66811 2.396

CAGE analysis