Hb_002235_090

Information

Type -
Description -
Location Contig2235: 49372-50842
Sequence    

Annotation

kegg
ID rcu:RCOM_0790960
description UDP-glucuronosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002525942.1
description UDP-glucuronosyltransferase, putative [Ricinus communis]
swissprot
ID U3UA11
description UDP-glucose iridoid glucosyltransferase OS=Catharanthus roseus GN=UGT76A2 PE=1 SV=1
trembl
ID B9SIX3
description UDP-glucuronosyltransferase, putative OS=Ricinus communis GN=RCOM_0790960 PE=3 SV=1
Gene Ontology
ID GO:0016757
description udp-glycosyltransferase 76e2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23200: 49258-49514
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002235_090 0.0 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
2 Hb_009730_010 0.1060147221 - - -
3 Hb_001882_140 0.2051340227 - - -
4 Hb_000261_270 0.2240153953 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
5 Hb_000858_040 0.3117727814 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
6 Hb_001005_180 0.3176726349 - - hypothetical protein Csa_5G464830 [Cucumis sativus]
7 Hb_022790_030 0.3224729463 - - PREDICTED: probable calcium-binding protein CML18 [Jatropha curcas]
8 Hb_007809_070 0.3248516479 - - conserved hypothetical protein [Ricinus communis]
9 Hb_030545_040 0.3414471315 - - -
10 Hb_047735_010 0.3437433031 - - DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
11 Hb_001124_150 0.3466246844 - - -
12 Hb_155103_010 0.3653458707 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
13 Hb_003589_010 0.3668541412 - - -
14 Hb_008948_030 0.367839875 - - hypothetical protein RCOM_0224470 [Ricinus communis]
15 Hb_003878_160 0.3696944571 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007320_050 0.3763295965 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
17 Hb_014749_010 0.3763665199 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
18 Hb_004162_310 0.3763988679 - - tonoplast intrinsic protein, putative [Ricinus communis]
19 Hb_181132_010 0.3765839014 - - -
20 Hb_002659_020 0.377560594 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]

Gene co-expression network

sample Hb_002235_090 Hb_002235_090 Hb_009730_010 Hb_009730_010 Hb_002235_090--Hb_009730_010 Hb_001882_140 Hb_001882_140 Hb_002235_090--Hb_001882_140 Hb_000261_270 Hb_000261_270 Hb_002235_090--Hb_000261_270 Hb_000858_040 Hb_000858_040 Hb_002235_090--Hb_000858_040 Hb_001005_180 Hb_001005_180 Hb_002235_090--Hb_001005_180 Hb_022790_030 Hb_022790_030 Hb_002235_090--Hb_022790_030 Hb_009730_010--Hb_000261_270 Hb_009730_010--Hb_000858_040 Hb_009730_010--Hb_001882_140 Hb_030545_040 Hb_030545_040 Hb_009730_010--Hb_030545_040 Hb_047735_010 Hb_047735_010 Hb_009730_010--Hb_047735_010 Hb_000022_210 Hb_000022_210 Hb_001882_140--Hb_000022_210 Hb_009398_010 Hb_009398_010 Hb_001882_140--Hb_009398_010 Hb_002289_030 Hb_002289_030 Hb_001882_140--Hb_002289_030 Hb_005316_010 Hb_005316_010 Hb_001882_140--Hb_005316_010 Hb_005204_060 Hb_005204_060 Hb_001882_140--Hb_005204_060 Hb_000261_270--Hb_000858_040 Hb_002450_160 Hb_002450_160 Hb_000261_270--Hb_002450_160 Hb_000261_270--Hb_001882_140 Hb_001146_090 Hb_001146_090 Hb_000261_270--Hb_001146_090 Hb_000858_040--Hb_002450_160 Hb_000858_040--Hb_001882_140 Hb_000858_040--Hb_001146_090 Hb_152868_010 Hb_152868_010 Hb_001005_180--Hb_152868_010 Hb_017469_090 Hb_017469_090 Hb_001005_180--Hb_017469_090 Hb_000364_200 Hb_000364_200 Hb_001005_180--Hb_000364_200 Hb_001538_170 Hb_001538_170 Hb_001005_180--Hb_001538_170 Hb_101376_010 Hb_101376_010 Hb_001005_180--Hb_101376_010 Hb_000251_060 Hb_000251_060 Hb_001005_180--Hb_000251_060 Hb_007809_070 Hb_007809_070 Hb_022790_030--Hb_007809_070 Hb_022790_030--Hb_047735_010 Hb_155103_010 Hb_155103_010 Hb_022790_030--Hb_155103_010 Hb_003589_010 Hb_003589_010 Hb_022790_030--Hb_003589_010 Hb_008948_030 Hb_008948_030 Hb_022790_030--Hb_008948_030 Hb_003878_160 Hb_003878_160 Hb_022790_030--Hb_003878_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0178157 0 0.0132992 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0384692 0

CAGE analysis